Glyma14g02020.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma14g02020.1 T52840_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma14g02020.1 RRM 8 76
Glyma14g02020.1 RRM 108 177

Links

Other RRM family RBPs
Other Glycine max RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma02g46650.1 Glycine max Glyma02g46650.1 N 0.993
Glyma18g09090.1 Glycine max Glyma18g09090.1 N 0.957
Glyma08g43740.1 Glycine max Glyma08g43740.1 N 0.950
chr2.LjT48A12.20.nd Lotus japonicus chr2.LjT48A12.20.nd N 0.936
Medtr3g076980 Medicago truncatula Medtr3g076980 N 0.928
PK25912.1 Cannabis sativa PK25912.1 N 0.921
chr2.LjT48A12.190.nd Lotus japonicus chr2.LjT48A12.190.nd N 0.914
chr6.LjT11E14.110.nc Lotus japonicus chr6.LjT11E14.110.nc N 0.914
ppa004834m Prunus persica ppa004834m N 0.906
ppa005122m Prunus persica ppa005122m N 0.906
MDP0000188788 Malus x domestica MDP0000188788 N 0.899
MDP0000204698 Malus x domestica MDP0000204698 N 0.899
MDP0000609551 Malus x domestica MDP0000609551 N 0.899
GSVIVG00037771001 Vitis vinifera GSVIVG00037771001 N 0.899
XM_002869554.1 Arabidopsis lyrata fgenesh2_kg.7__1574__AT4G26650.1 N 0.892
AT4G26650 Arabidopsis thaliana AT4G26650-TAIR-G N 0.892
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.892
27613.m000635 Ricinus communis 27613.m000635 N 0.885
Cucsa.042370 Cucumis sativus Cucsa.042370 N 0.885
B9GJW8_POPTR Populus trichocarpa POPTR_0001s37230 N 0.878
B9I165_POPTR Populus trichocarpa POPTR_0011s09050 N 0.871
ppa005119m Prunus persica ppa005119m N 0.856
ppa005132m Prunus persica ppa005132m N 0.856
mgf009385m Mimulus guttatus mgf009385m N 0.856
Glyma02g47690.1 Glycine max Glyma02g47690.1 N 0.856
Glyma14g00970.1 Glycine max Glyma14g00970.1 N 0.856
chr6.LjT16B20.40.nc Lotus japonicus chr6.LjT16B20.40.nc N 0.856
B9GTG8_POPTR Populus trichocarpa POPTR_0002s22120 N 0.849
MDP0000320618 Malus x domestica MDP0000320618 N 0.849
AT5G55550 Arabidopsis thaliana AT5G55550-TAIR-G N 0.849
GSVIVG00030040001 Vitis vinifera GSVIVG00030040001 N 0.849
B9HCV4_POPTR Populus trichocarpa POPTR_0006s01680 N 0.849
30048.m000319 Ricinus communis 30048.m000319 N 0.849
29608.m000212 Ricinus communis 29608.m000212 N 0.849
XM_002862650.1 Arabidopsis lyrata fgenesh2_kg.8__1457__AT5G55550.1 N 0.842
MDP0000907782 Malus x domestica MDP0000907782 N 0.842
mgf012147m Mimulus guttatus mgf012147m N 0.842
Medtr5g105300 Medicago truncatula Medtr5g105300 N 0.842
POPTR_0016s01150 Populus trichocarpa POPTR_0016s01150 N 0.842
Medtr2g030270 Medicago truncatula Medtr2g030270 N 0.842
cassava10847.m1 Manihot esculenta cassava10847.m1 N 0.842
cassava12077.valid.m1 Manihot esculenta cassava12077.valid.m1 N 0.835
cassava12078.valid.m1 Manihot esculenta cassava12078.valid.m1 N 0.835
XM_002882506.1 Arabidopsis lyrata fgenesh2_kg.3__820__AT3G07810.2 N 0.835
AT3G07810 Arabidopsis thaliana AT3G07810-TAIR-G N 0.835
Cucsa.180480 Cucumis sativus Cucsa.180480 N 0.835
MDP0000642684 Malus x domestica MDP0000642684 N 0.835
B9IAN1_POPTR Populus trichocarpa POPTR_0014s15970 N 0.830
LOC_Os11g41890 Oryza sativa LOC_Os11g41890 N 0.829
cassava23136.valid.m1 Manihot esculenta cassava23136.valid.m1 N 0.827
BRADI4G12200 Brachypodium distachyon BRADI4G12200 N 0.821
Cucsa.120420 Cucumis sativus Cucsa.120420 N 0.820
cassava865.valid.m1 Manihot esculenta cassava865.valid.m1 N 0.820
PK13457.1 Cannabis sativa PK13457.1 N 0.806
mgf004139m Mimulus guttatus mgf004139m N 0.799
GRMZM2G013065 Zea mays GRMZM2G013065 N 0.791
SB02G005620 Sorghum bicolor Sb02g005620 N 0.791
SB02G005670 Sorghum bicolor Sb02g005670 N 0.791
mgf009486m Mimulus guttatus mgf009486m N 0.786
BRADI1G23280 Brachypodium distachyon BRADI1G23280 N 0.784
GRMZM2G162954 Zea mays GRMZM2G162954 N 0.784
SB02G037690 Sorghum bicolor Sb02g037690 N 0.784
BGIOSIBCE025402 Oryza indica BGIOSIBCE025402 N 0.777
GRMZM2G144890 Zea mays GRMZM2G144890 N 0.777
GRMZM2G022313 Zea mays GRMZM2G022313 N 0.770
LOC_Os07g39560 Oryza sativa LOC_Os07g39560 N 0.770
GRMZM2G014400 Zea mays GRMZM2G014400 N 0.770
AT5G47620 Arabidopsis thaliana AT5G47620-TAIR-G N 0.763
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.763
XM_002863283.1 Arabidopsis lyrata Al_scaffold_0008_26 N 0.763
Medtr4g155980 Medicago truncatula Medtr4g155980 N 0.755
CM1092.170.nc Lotus japonicus CM1092.170.nc N 0.723
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.719
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.712
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.712
SB05G025410 Sorghum bicolor Sb05g025410 N 0.712
estExt_Genewise1Plus.C_180065 Selaginella moellendorfii estExt_Genewise1Plus.C_180065 N 0.712