e_gw1.96.1.1 (Physcomitrella patens)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 e_gw1.96.1.1 T24757_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.96.1.1 PUF 801 835
e_gw1.96.1.1 PUF 837 871
e_gw1.96.1.1 PUF 873 908
e_gw1.96.1.1 PUF 909 943
e_gw1.96.1.1 PUF 945 977
e_gw1.96.1.1 PUF 982 1016
e_gw1.96.1.1 PUF 1018 1052
e_gw1.96.1.1 PUF 1065 1094

Links

Other PUF family RBPs
Other Physcomitrella patens RBPs

99 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30143.m001164 Ricinus communis 30143.m001164 N 0.783
BGIOSIBCE005171 Oryza indica BGIOSIBCE005171 N 0.754
BGIOSIBCE017275 Oryza indica BGIOSIBCE017275 N 0.768
BRADI2G39240 Brachypodium distachyon BRADI2G39240 N 0.756
BRADI2G39410 Brachypodium distachyon BRADI2G39410 N 0.756
cassava13144.valid.m1 Manihot esculenta cassava13144.valid.m1 N 0.786
cassava19436.valid.m1 Manihot esculenta cassava19436.valid.m1 N 0.783
cassava19437.valid.m1 Manihot esculenta cassava19437.valid.m1 N 0.781
cassava30948.valid.m1 Manihot esculenta cassava30948.valid.m1 N 0.781
cassava30949.valid.m1 Manihot esculenta cassava30949.valid.m1 N 0.781
Cucsa.138830 Cucumis sativus Cucsa.138830 N 0.783
Cucsa.165170 Cucumis sativus Cucsa.165170 N 0.765
Glyma11g14500.1 Glycine max Glyma11g14500.1 N 0.780
Glyma11g14530.1 Glycine max Glyma11g14530.1 N 0.783
Glyma11g14550.1 Glycine max Glyma11g14550.1 N 0.783
Glyma12g06430.1 Glycine max Glyma12g06430.1 N 0.787
Glyma12g06450.1 Glycine max Glyma12g06450.1 N 0.787
Glyma15g04060.1 Glycine max Glyma15g04060.1 N 0.781
GRMZM2G012964 Zea mays GRMZM2G012964 N 0.753
GRMZM2G042623 Zea mays GRMZM2G042623 N 0.760
GSVIVG00016507001 Vitis vinifera GSVIVG00016507001 N 0.801
GSVIVG00024918001 Vitis vinifera GSVIVG00024918001 N 0.794
LOC_Os01g62650 Oryza sativa LOC_Os01g62650 N 0.786
LOC_Os01g74030 Oryza sativa LOC_Os01g74030 N 0.754
LOC_Os05g01910 Oryza sativa LOC_Os05g01910 N 0.768
MDP0000191652 Malus x domestica MDP0000191652 N 0.745
MDP0000314338 Malus x domestica MDP0000314338 N 0.779
MDP0000319167 Malus x domestica MDP0000319167 N 0.792
MDP0000776183 Malus x domestica MDP0000776183 N 0.773
Medtr2g117180 Medicago truncatula Medtr2g117180 N 0.785
Medtr4g084270 Medicago truncatula Medtr4g084270 N 0.783
mgf015234m Mimulus guttatus mgf015234m N 0.754
mgf015734m Mimulus guttatus mgf015734m N 0.781
PK00601.1 Cannabis sativa PK00601.1 N 0.791
PK21390.1 Cannabis sativa PK21390.1 N 0.779
B9HMK2_POPTR Populus trichocarpa POPTR_0008s05850 N 0.779
B9HTG3_POPTR Populus trichocarpa POPTR_0010s20870 N 0.790
ppa000626m Prunus persica ppa000626m N 0.787
ppa000627m Prunus persica ppa000627m N 0.788
SB03G039600 Sorghum bicolor Sb03g039600 N 0.786
SB09G001090 Sorghum bicolor Sb09g001090 N 0.756