ENSGGOG00000025265 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000025265 T37925_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.865
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.865
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.865
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.844
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000020288 RRM 16 85
ENSGGOP00000020288 RRM 107 176

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

219 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.000
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.000
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.000
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.000
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.000
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.000
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.000
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.000
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.000
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.000
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.000
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.000
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.000
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.000
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.000
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.000
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.000
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.000
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.000
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.000
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.000
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.000
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.000
KRR1 Saccharomyces cerevisiae YCL059C N 0.000
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.000
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.000
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.000
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.000
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.000
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.000