CELF6 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000034360 T40821_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.981
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.824
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.821
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.761
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.730
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000056433 RRM 219 289
ENSPTRP00000056773 RRM 1 69
ENSPTRP00000056773 RRM 88 155
ENSPTRP00000056773 RRM 347 417
ENSPTRP00000059665 RRM 23 90
ENSPTRP00000059665 RRM 282 352

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

147 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI10719 Xenopus laevis AAI10719 N 0.000
SF1 Pteropus vampyrus ENSPVAG00000016938 N 0.000
SF1 Pan troglodytes ENSPTRG00000003846 N 0.000
ENSPPYG00000003098 Pongo pygmaeus ENSPPYG00000003098 N 0.000
SF1 Procavia capensis ENSPCAG00000013631 N 0.000
SF1 Oryzias latipes ENSORLG00000011853 N 0.000
SF1 Ochotona princeps ENSOPRG00000005008 N 0.000
B7NZI1_RABIT Oryctolagus cuniculus ENSOCUG00000026486 N 0.000
SF1 Ornithorhynchus anatinus ENSOANG00000002909 N 0.000
Sf1 Rattus norvegicus ENSRNOG00000021085 N 0.000
SF1 Sus scrofa ENSSSCG00000013021 N 0.000
SF1 Tupaia belangeri ENSTBEG00000013133 N 0.000
AAH46717 Xenopus laevis AAH46717 N 0.000
Ame_R004551 Ailuropoda melanoleuca Ame_R004551 N 0.000
BGIBMGA013450 Bombyx mori BGIBMGA013450 N 0.000
estExt_fgenesh1_pg.C_1320011 Capitella teleta estExt_fgenesh1_pg.C_1320011 N 0.000
sf1 Xenopus tropicalis ENSXETG00000008434 N 0.000
SF1 Tursiops truncatus ENSTTRG00000008857 N 0.000
SF1 Tetraodon nigroviridis ENSTNIG00000004820 N 0.000
SF1 Taeniopygia guttata ENSTGUG00000016087 N 0.000
Sf1 Mus musculus ENSMUSG00000024949 N 0.000
SF1 Macaca mulatta ENSMMUG00000022606 N 0.000
sf1 Danio rerio ENSDARG00000008188 N 0.000
ENSCSAVG00000009055 Ciona savignyi ENSCSAVG00000009055 N 0.000
SF1 Cavia porcellus ENSCPOG00000012290 N 0.000
B0KWK3_CALJA Callithrix jacchus ENSCJAG00000002780 N 0.000
ENSCING00000005564 Ciona intestinalis ENSCING00000005564 N 0.000
SF1 Choloepus hoffmanni ENSCHOG00000006008 N 0.000
SF1 Canis familiaris ENSCAFG00000014239 N 0.000
SF1 Bos taurus ENSBTAG00000001035 N 0.000
Sf1 Dipodomys ordii ENSDORG00000016334 N 0.000
SF1 Equus caballus ENSECAG00000024544 N 0.000
SF1 Echinops telfairi ENSETEG00000012830 N 0.000
SF1 Myotis lucifugus ENSMLUG00000015217 N 0.000
SF1 Microcebus murinus ENSMICG00000001202 N 0.000
SF1 Macropus eugenii ENSMEUG00000013424 N 0.000
SF1 Loxodonta africana ENSLAFG00000007201 N 0.000
SF1 Gorilla gorilla ENSGGOG00000012733 N 0.000
SF1 Gasterosteus aculeatus ENSGACG00000000826 N 0.000
SF1 Homo sapiens ENSG00000168066 N 0.000
SF1 Felis catus ENSFCAG00000012231 N 0.000
SF1 Anolis carolinensis ENSACAG00000016404 N 0.000