amel4_ncbi_hmm2036 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm2036 T31877_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pAbp
M130_0.6 		Drosophila melanogaster GAAAAHV RNAcompete
Ray et al.(2013)
RNCMPT00139 		0.766
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.757
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.757
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.757
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.743
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm2036 RRM 13 83
amel4_ncbi_hmm2036 RRM 101 170
amel4_ncbi_hmm2036 RRM 194 263
amel4_ncbi_hmm2036 RRM 298 366

Links

Other RRM family RBPs
Other Apis mellifera RBPs

144 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NOP9 Saccharomyces cerevisiae YJL010C N 0.000
12269_YJL010C Saccharomyces paradoxus 12269_YJL010C N 0.000
A7TH34_VANPO Vanderwaltozyma polyspora A7TH34_VANPO N 0.000
CAGL0E06534g Candida glabrata CAGL0E06534g N 0.000
KLLA0E13685g Kluyveromyces lactis KLLA0E13685g N 0.000
KLTH0G07612g Kluyveromyces thermotolerans KLTH0G07612g N 0.000
ZYRO0A10648g Zygosaccharomyces rouxii ZYRO0A10648g N 0.000