ENSCAFG00000007198 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000007198 T35050_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.878
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.878
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.878
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.865
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.716
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000035024 RRM 5 80
ENSCAFP00000035024 RRM 96 166

Links

Other RRM family RBPs
Other Canis familiaris RBPs

229 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1 Homo sapiens ENSG00000135486 D 0.878
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.865
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.850
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.872
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.878
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.858
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.878
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.878
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.865
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.758
Gm8991 Mus musculus ENSMUSG00000059179 I 0.764
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.765
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.878
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.865
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.865
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.872
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.865
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.725
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.704
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.732
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.776
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.713
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.777
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.872
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.717
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.858
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.872
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.878
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.858
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.785
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.765
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.830
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.735
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.711
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.717
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.752
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.765
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.765
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.865
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.805
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.878
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.785
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.872
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.872
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.757
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.776
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.850
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.805
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.872
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.878
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.745
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.803
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.724
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.779
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.878
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.728
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.764
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.765
P51992 Xenopus laevis P51992 I 0.760
AAA49741 Xenopus laevis AAA49741 I 0.791
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.816
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.743
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.878
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.811
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.777
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.765
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.878
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.750
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.736
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.764
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.871
AAA49742 Xenopus laevis AAA49742 I 0.791
AAA49949 Xenopus laevis AAA49949 I 0.770
P51968 Xenopus laevis P51968 I 0.770
P17130 Xenopus laevis P17130 I 0.791
CBU92546 Xenopus laevis CBU92546 I 0.804
CBU92451 Xenopus laevis CBU92451 I 0.760
CBU92428 Xenopus laevis CBU92428 I 0.791
CBF67672 Xenopus laevis CBF67672 I 0.804
CBF67578 Xenopus laevis CBF67578 I 0.760
CBF67555 Xenopus laevis CBF67555 I 0.791
AAI69881 Xenopus laevis AAI69881 I 0.760
AAH72090 Xenopus laevis AAH72090 I 0.804
AAH45260 Xenopus laevis AAH45260 I 0.811
AAA49950 Xenopus laevis AAA49950 I 0.760
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.844
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.878
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.810
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.789
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.824
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.810
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.705
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.816
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.824
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.707
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.765
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.765
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.878
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.878
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.878
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.830
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.765
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.765
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.789
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.878
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.797
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.716
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.718
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.845
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.757
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.878
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.839
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.743
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.845
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.878
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.846
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.718
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.758
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.845
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.792
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.793
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.799
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.799
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.724
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.747
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.810
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.792
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.743
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.816
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.787
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.823
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.735
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.712
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.823
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.717
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.715
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.851
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.872
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.858
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.816
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.805
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.752
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.864
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.765
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.711
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.838
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.792
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.765
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.792
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.830
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.772
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.727
LOC785445 Bos taurus ENSBTAG00000025621 I 0.864
LOC781499 Bos taurus ENSBTAG00000021580 I 0.765
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.706
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.878
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.770
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.785
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.823
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.812
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.865
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.709
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.730
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.733
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.787
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.838
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.823
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.878
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.824
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.724
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.773
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.865
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.858
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.765
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.797
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.713
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.737
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.878
HNRNPA3 Homo sapiens ENSG00000170144 I 0.765
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.764
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.878
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.816
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.769
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.769
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.865
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.838
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.764
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.878
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.838
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.872
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.733
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.851
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.810
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.837
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.709
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.892
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.776
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.711
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.709
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.765
LOC100066794 Equus caballus ENSECAG00000023237 I 0.764
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.878
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.831
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.851
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.851
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.765
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.816
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.878
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.878
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.816
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.857
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.704
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.837
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.844
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.789
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.830
LOC100054206 Equus caballus ENSECAG00000006699 I 0.812
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.797
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.765
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.878
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.723
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.736
zgc:66127 Danio rerio ENSDARG00000011020 I 0.716
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.851
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.765
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.765
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.850
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.878
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.818