BRUNOL6 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000140488 T37269_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6		 Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.838
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.821
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.761
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.744
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M178_0.6 RRM 48 117
M178_0.6 RRM 136 203
M178_0.6 RRM 398 468

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000287202 RRM 48 117
ENSP00000287202 RRM 136 203
ENSP00000287202 RRM 398 468
ENSP00000369247 RRM 222 292
ENSP00000378677 RRM 23 90
ENSP00000378677 RRM 285 355
ENSP00000400439 RRM 48 117
ENSP00000400439 RRM 136 203
ENSP00000400439 RRM 371 441

Links

Other RRM family RBPs
Other Homo sapiens RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
unc-75 Caenorhabditis elegans C17D12.2 D 0.720
BRUNOL4 Homo sapiens ENSG00000101489 D 0.749
bru-3 Drosophila melanogaster FBgn0262350 D 0.821
etr-1 Caenorhabditis elegans T01D1.2 D 0.718
BRUNOL5 Homo sapiens ENSG00000161082 D 0.838
GF19661 Drosophila ananassae FBgn0096668 I 0.761
GF10965 Drosophila ananassae FBgn0088005 I 0.821
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.859
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.843
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.810
GG13757 Drosophila erecta FBgn0106020 I 0.821
GG23781 Drosophila erecta FBgn0115920 I 0.761
GI13095 Drosophila mojavensis FBgn0135852 I 0.829
GH14684 Drosophila grimshawi FBgn0122160 I 0.829
GI17947 Drosophila mojavensis FBgn0140687 I 0.746
GL21647 Drosophila persimilis FBgn0159240 I 0.813
GM24582 Drosophila sechellia FBgn0179445 I 0.821
GM26796 Drosophila sechellia FBgn0181649 I 0.761
GD12651 Drosophila simulans FBgn0184378 I 0.821
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.744
CELF6 Tursiops truncatus ENSTTRG00000002503 I 0.773
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.807
CELF6 Sus scrofa ENSSSCG00000001928 I 0.990
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.819
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.821
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.986
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.749
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.990
CELF6 Pan troglodytes ENSPTRG00000034360 I 1.000
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.810
CELF3 Sus scrofa ENSSSCG00000006618 I 0.800
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.729
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.814
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.814
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.850
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.814
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.807
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.833
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.873
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.821
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.819
GD23834 Drosophila simulans FBgn0195204 I 0.761
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.729
BGIBMGA005893 Bombyx mori BGIBMGA005893 I 0.887
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.819
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.990
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.843
Smp_041280 Schistosoma mansoni Smp_041280 I 0.807
Smp_131780 Schistosoma mansoni Smp_131780 I 0.750
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.708
Q91579 Xenopus laevis Q91579 I 0.824
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.708
AAA81375 Xenopus laevis AAA81375 I 0.824
AAH46942 Xenopus laevis AAH46942 I 0.814
AAH57704 Xenopus laevis AAH57704 I 0.824
AAH72134 Xenopus laevis AAH72134 I 0.824
ACH69784 Xenopus laevis ACH69784 I 0.749
ACH69785 Xenopus laevis ACH69785 I 0.819
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 0.887
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 0.887
GJ13842 Drosophila virilis FBgn0201061 I 0.829
GK17101 Drosophila willistoni FBgn0219100 I 0.829
GE20053 Drosophila yakuba FBgn0237378 I 0.821
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.821
ISCW008885 Ixodes scapularis ISCW008885 I 0.789
ISCW010799 Ixodes scapularis ISCW010799 I 0.887
PHUM315130 Pediculus humanus PHUM315130 I 0.821
Ppa-etr-1 Pristionchus pacificus PPA28330 I 0.718
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.789
136083 Helobdella robusta 136083 I 0.761
62054 Helobdella robusta 62054 I 0.743
90208 Helobdella robusta 90208 I 0.709
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.775
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.741
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.805
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.901
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.814
Bm1_27610 Brugia malayi Bm1_27610 I 0.752
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.986
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.789
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.749
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.819
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.829
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.804
CELF3 Danio rerio ENSDARG00000006983 I 0.781
celf3 Danio rerio ENSDARG00000034668 I 0.800
celf5 Danio rerio ENSDARG00000071375 I 0.810
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.867
CELF3 Equus caballus ENSECAG00000020365 I 0.819
CELF6 Felis catus ENSFCAG00000016249 I 0.990
CELF3 Homo sapiens ENSG00000159409 I 0.845
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.814
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.720
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.833
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.829
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.819
LOAG_05508 Loa loa LOAG_05508 I 0.743
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.845
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.775
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.786
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.771
AAEL003979 Aedes aegypti AAEL003979 I 0.859
AAEL014033 Aedes aegypti AAEL014033 I 0.807
AGAP004950 Anopheles gambiae AGAP004950 I 0.807
CBG15358 Caenorhabditis briggsae CBG15358 I 0.730
CJA07020 Caenorhabditis japonica CJA07020 I 0.729
CRE09771 Caenorhabditis remanei CRE09771 I 0.730
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.930
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.814
CELF6 Bos taurus ENSBTAG00000014092 I 0.990
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.819
CELF3 Canis familiaris ENSCAFG00000012794 I 0.819
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.800
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.850
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.850
Celf4 Mus musculus ENSMUSG00000024268 I 0.843
Celf3 Mus musculus ENSMUSG00000028137 I 0.819
Celf6 Mus musculus ENSMUSG00000032297 I 0.986
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.930
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.819
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.857
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.848
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.813
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.794
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.986
CELF5 Oryzias latipes ENSORLG00000004600 I 0.810
CELF4 Oryzias latipes ENSORLG00000008913 I 0.829
CELF3 Oryzias latipes ENSORLG00000010447 I 0.789
CELF6 Oryzias latipes ENSORLG00000013392 I 0.843
CELF3 Procavia capensis ENSPCAG00000001623 I 0.790
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.986
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.829
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.819
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.900
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.821
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.809
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.749
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.995
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.819
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.793
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.976
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.848
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.819
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.703
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.701
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.810
HEXA Macaca mulatta ENSMMUG00000010687 I 1.000
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.859
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.729
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.754
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.700