ENSCAFG00000007879 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000007879 T35057_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.929
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.929
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.929
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.908
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.759
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000011652 RRM 15 85
ENSCAFP00000011652 RRM 107 175

Links

Other RRM family RBPs
Other Canis familiaris RBPs

301 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.804
AAA49742 Xenopus laevis AAA49742 I 0.804
AAA49948 Xenopus laevis AAA49948 I 0.703
AAA49949 Xenopus laevis AAA49949 I 0.769
AAA49950 Xenopus laevis AAA49950 I 0.759
AAH45260 Xenopus laevis AAH45260 I 0.818
AAH46692 Xenopus laevis AAH46692 I 0.703
AAH72090 Xenopus laevis AAH72090 I 0.818
AAI69881 Xenopus laevis AAI69881 I 0.759
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.710
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.895
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.804
CBF67555 Xenopus laevis CBF67555 I 0.804
CBF67577 Xenopus laevis CBF67577 I 0.703
CBF67578 Xenopus laevis CBF67578 I 0.759
CBF67672 Xenopus laevis CBF67672 I 0.818
CBU92428 Xenopus laevis CBU92428 I 0.804
CBU92450 Xenopus laevis CBU92450 I 0.703
CBU92451 Xenopus laevis CBU92451 I 0.759
CBU92546 Xenopus laevis CBU92546 I 0.818
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.881
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.776
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.895
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.710
LOC781499 Bos taurus ENSBTAG00000021580 I 0.771
LOC785445 Bos taurus ENSBTAG00000025621 I 0.846
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.803
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.736
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.851
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.811
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.851
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.710
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.755
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.865
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.724
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.865
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.860
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.825
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.811
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.866
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.738
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.825
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.895
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.818
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.769
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.860
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.787
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.747
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.837
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.772
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.740
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.881
ENSCAFG00000010467 Canis familiaris ENSCAFG00000010467 I 0.000
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.908
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.772
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.771
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.752
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.783
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.793
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.872
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.790
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.738
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.789
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.752
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.844
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.728
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.709
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.858
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.873
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.865
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.731
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.853
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.752
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.844
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.852
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.825
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.703
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.818
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.830
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.894
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.818
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.874
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.888
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.839
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.792
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.755
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.825
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.753
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.804
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.710
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.895
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.853
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.853
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.832
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.731
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.832
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.804
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.895
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.895
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.804
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.710
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.771
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.867
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.867
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.832
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.769
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.818
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.895
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.846
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.771
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.771
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.867
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.755
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.895
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.710
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.771
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.710
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.811
LOC100068539 Equus caballus ENSECAG00000000782 I 0.710
LOC100054206 Equus caballus ENSECAG00000006699 I 0.887
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.895
LOC100066794 Equus caballus ENSECAG00000023237 I 0.769
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.846
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.888
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.776
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.762
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.718
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.818
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.703
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.710
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.895
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.769
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.710
HNRNPA1 Homo sapiens ENSG00000135486 D 0.895
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.874
HNRNPA3 Homo sapiens ENSG00000170144 I 0.771
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.895
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.745
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.804
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.769
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.710
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.895
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.771
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.710
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.000
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.724
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.790
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.881
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.825
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.804
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.710
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.867
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.816
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.888
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.846
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.710
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.771
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.710
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.854
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.769
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.710
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.830
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.733
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.895
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.887
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.881
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.771
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.710
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.771
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.710
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.733
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.724
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.818
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.888
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.874
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.766
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.757
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.895
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.851
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.760
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.797
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.795
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.888
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.874
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.837
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.832
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.710
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.841
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.771
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.837
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.710
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.874
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.895
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.771
Gm8991 Mus musculus ENSMUSG00000059179 I 0.769
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.710
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.764
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.881
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.895
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.860
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.888
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.888
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.832
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.867
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.881
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.888
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.895
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.710
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.881
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.874
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.738
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.888
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.790
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.801
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.759
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.710
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.874
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.895
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.771
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.710
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.895
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.895
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.895
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.895
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.710
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.771
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.771
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.839
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.839
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.710
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.825
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.839
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.783
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.853
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.771
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.867
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.748
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.760
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.867
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.895
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.762
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.867
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.773
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.811
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.895
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.771
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.710
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.804
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.895
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.825
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.853
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.717
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.769
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.762
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.710
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.895
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.771
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.776
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.000
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.825
P17130 Xenopus laevis P17130 I 0.804
P51968 Xenopus laevis P51968 I 0.769
P51989 Xenopus laevis P51989 I 0.703
P51992 Xenopus laevis P51992 I 0.759