CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
mgf014829m
(
Mimulus guttatus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
mgf014829m
T62427_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf014829m
YTH
371
461
LFFSVNGSGQFVGVAEMIGQVDFSKNMDFWQLDKWNGFFPIKWHMIKDVPNTLLRHIILENNENRPVTYSRDTQEIGLKQGLEMLRIFKNY
Links
Other
YTH
family RBPs
Other
Mimulus guttatus
RBPs
132 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CC1G_13963
Coprinopsis cinerea
CC1G_13963
N
0.000
estExt_Genewise1.C_220013
Postia placenta
estExt_Genewise1.C_220013
N
0.000
estExt_Genewise1Plus.C_21122
Schizophyllum commune
estExt_Genewise1Plus.C_21122
N
0.000
gwh1.2.40.1
Laccaria bicolor
gwh1.2.40.1
N
0.000
estExt_fgenesh2_pg.C_20480
Agaricus bisporus
estExt_fgenesh2_pg.C_20480
N
0.000
estExt_Genewise1Plus.C_11031
Pleurotus ostreatus
estExt_Genewise1Plus.C_11031
N
0.000
EuGene2000855
Heterobasidion annosum
EuGene2000855
N
0.000