mgf014829m (Mimulus guttatus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 mgf014829m T62427_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf014829m YTH 371 461

Links

Other YTH family RBPs
Other Mimulus guttatus RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002884922.1 Arabidopsis lyrata fgenesh2_kg.3__1434__AT3G13460.1 N 0.000
XM_002866364.1 Arabidopsis lyrata fgenesh2_kg.8__2071__AT5G61020.1 N 0.000
XM_002882275.1 Arabidopsis lyrata fgenesh2_kg.3__349__AT3G03950.3 N 0.000
XM_002891791.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1004195 N 0.000
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.725
XM_002887730.1 Arabidopsis lyrata fgenesh2_kg.2__2224__AT1G79270.1 N 0.747
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.714
ECT3 Arabidopsis thaliana AT5G61020-TAIR-G N 0.000
ECT2 Arabidopsis thaliana AT3G13460-TAIR-G N 0.000
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.714
ECT1 Arabidopsis thaliana AT3G03950-TAIR-G N 0.000
ECT8 Arabidopsis thaliana AT1G79270-TAIR-G N 0.758
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.725
BRADI5G01317 Brachypodium distachyon BRADI5G01317 N 0.736
BRADI4G02150 Brachypodium distachyon BRADI4G02150 N 0.000
BRADI3G42640 Brachypodium distachyon BRADI3G42640 N 0.000
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.725
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.000
BRADI1G05970 Brachypodium distachyon BRADI1G05970 N 0.000
BRADI2G46590 Brachypodium distachyon BRADI2G46590 N 0.758
PK17832.1 Cannabis sativa PK17832.1 N 0.703
PK23104.1 Cannabis sativa PK23104.1 N 0.736
PK23716.1 Cannabis sativa PK23716.1 N 0.000
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.758
Cucsa.142200 Cucumis sativus Cucsa.142200 N 0.725
Glyma05g30020.1 Glycine max Glyma05g30020.1 N 0.703
Glyma07g36110.1 Glycine max Glyma07g36110.1 N 0.747
Glyma08g24210.1 Glycine max Glyma08g24210.1 N 0.725
Glyma09g03590.1 Glycine max Glyma09g03590.1 N 0.758
Glyma16g04590.1 Glycine max Glyma16g04590.1 N 0.000
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.769
Glyma19g28710.1 Glycine max Glyma19g28710.1 N 0.000
Glyma08g13130.1 Glycine max Glyma08g13130.1 N 0.703
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.747
MDP0000171737 Malus x domestica MDP0000171737 N 0.802
MDP0000718677 Malus x domestica MDP0000718677 N 0.000
MDP0000617859 Malus x domestica MDP0000617859 N 0.747
MDP0000552419 Malus x domestica MDP0000552419 N 0.736
MDP0000488588 Malus x domestica MDP0000488588 N 0.000
MDP0000124048 Malus x domestica MDP0000124048 N 0.000
MDP0000405927 Malus x domestica MDP0000405927 N 0.747
MDP0000306387 Malus x domestica MDP0000306387 N 0.725
MDP0000287088 Malus x domestica MDP0000287088 N 0.747
MDP0000129009 Malus x domestica MDP0000129009 N 0.000
MDP0000231231 Malus x domestica MDP0000231231 N 0.780
MDP0000132385 Malus x domestica MDP0000132385 N 0.725
MDP0000248088 Malus x domestica MDP0000248088 N 0.736
MDP0000286471 Malus x domestica MDP0000286471 N 0.780
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.000
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.000
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.000
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.000
cassava22612.valid.m1 Manihot esculenta cassava22612.valid.m1 N 0.000
cassava20495.m1 Manihot esculenta cassava20495.m1 N 0.703
cassava20494.m1 Manihot esculenta cassava20494.m1 N 0.703
cassava1918.valid.m1 Manihot esculenta cassava1918.valid.m1 N 0.703
cassava1917.valid.m1 Manihot esculenta cassava1917.valid.m1 N 0.703
cassava1916.valid.m1 Manihot esculenta cassava1916.valid.m1 N 0.703
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.000
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.000
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.780
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.780
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.000
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.000
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.000
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.000
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.000
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.000
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.000
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.000
cassava18205.valid.m1 Manihot esculenta cassava18205.valid.m1 N 0.703
cassava18204.valid.m1 Manihot esculenta cassava18204.valid.m1 N 0.703
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.000
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.000
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.000
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.000
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.000
cassava17771.valid.m1 Manihot esculenta cassava17771.valid.m1 N 0.780
cassava17772.valid.m1 Manihot esculenta cassava17772.valid.m1 N 0.780
cassava18203.valid.m1 Manihot esculenta cassava18203.valid.m1 N 0.703
Medtr2g036990 Medicago truncatula Medtr2g036990 N 0.758
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.758
Medtr7g100450 Medicago truncatula Medtr7g100450 N 0.000
Medtr6g030800 Medicago truncatula Medtr6g030800 N 0.000
Medtr6g030790 Medicago truncatula Medtr6g030790 N 0.000
Medtr4g136900 Medicago truncatula Medtr4g136900 N 0.000
mgf009938m Mimulus guttatus mgf009938m N 0.703
mgf013853m Mimulus guttatus mgf013853m N 0.703
mgf019821m Mimulus guttatus mgf019821m N 0.000
mgf013935m Mimulus guttatus mgf013935m N 0.000
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.758
BGIOSIBCE028829 Oryza indica BGIOSIBCE028829 N 0.703
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.725
BGIOSIBCE009738 Oryza indica BGIOSIBCE009738 N 0.000
BGIOSIBCE003171 Oryza indica BGIOSIBCE003171 N 0.758
BGIOSIBCE023845 Oryza indica BGIOSIBCE023845 N 0.000
LOC_Os07g07490 Oryza sativa LOC_Os07g07490 N 0.000
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.769
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.725
LOC_Os01g48790 Oryza sativa LOC_Os01g48790 N 0.758
LOC_Os03g06240 Oryza sativa LOC_Os03g06240 N 0.000
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.758
LOC_Os08g44200 Oryza sativa LOC_Os08g44200 N 0.703
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.000
PDK_20s1631851g001 Phoenix dactylifera PDK_20s1631851g001 N 0.758
A9PED2_POPTR Populus trichocarpa POPTR_0019s04990 N 0.000
B9HYD4_POPTR Populus trichocarpa POPTR_0010s18300 N 0.758
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.703
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.736
B9HI18_POPTR Populus trichocarpa POPTR_0008s08030 N 0.769
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.703
B9GXX7_POPTR Populus trichocarpa POPTR_0003s20840 N 0.000
B9GMK5_POPTR Populus trichocarpa POPTR_0001s13870 N 0.725
B9HBC4_POPTR Populus trichocarpa POPTR_0006s07970 N 0.000
ppa002483m Prunus persica ppa002483m N 0.725
ppa002588m Prunus persica ppa002588m N 0.725
ppa003664m Prunus persica ppa003664m N 0.780
ppa018635m Prunus persica ppa018635m N 0.769
30169.m006347 Ricinus communis 30169.m006347 N 0.000
29890.m000285 Ricinus communis 29890.m000285 N 0.000
29889.m003364 Ricinus communis 29889.m003364 N 0.769
29950.m001140 Ricinus communis 29950.m001140 N 0.000
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.725
SB02G003990 Sorghum bicolor Sb02g003990 N 0.000
SB03G031190 Sorghum bicolor Sb03g031190 N 0.747
SB01G005500 Sorghum bicolor Sb01g005500 N 0.000
SB01G008170 Sorghum bicolor Sb01g008170 N 0.703
SB06G027960 Sorghum bicolor Sb06g027960 N 0.703
SB07G006330 Sorghum bicolor Sb07g006330 N 0.747
SB07G024500 Sorghum bicolor Sb07g024500 N 0.725
GSVIVG00036696001 Vitis vinifera GSVIVG00036696001 N 0.791
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.802
GSVIVG00025494001 Vitis vinifera GSVIVG00025494001 N 0.714
GSVIVG00029460001 Vitis vinifera GSVIVG00029460001 N 0.000
GSVIVG00032236001 Vitis vinifera GSVIVG00032236001 N 0.000
GSVIVG00033395001 Vitis vinifera GSVIVG00033395001 N 0.000
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.725
GRMZM2G169116 Zea mays GRMZM2G169116 N 0.747
GRMZM2G144726 Zea mays GRMZM2G144726 N 0.000
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.703
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.725
GRMZM2G025488 Zea mays GRMZM2G025488 N 0.714
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.747