ENSCJAG00000033784 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000033784 T35724_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.872
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.872
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.872
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.851
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.709
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000035058 RRM 15 84
ENSCJAP00000035058 RRM 106 174

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

242 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.864
HNRNPA1 Homo sapiens ENSG00000135486 D 0.886
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.886
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.879
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.871
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.857
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.829
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.879
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.886
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.850
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.886
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.871
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.759
Gm8991 Mus musculus ENSMUSG00000059179 I 0.771
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.886
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.879
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.864
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.721
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.766
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.886
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.879
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.707
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.730
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.724
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.738
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.791
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.718
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.779
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.879
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.724
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.766
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.886
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.864
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.879
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.829
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.721
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.717
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.738
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.711
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.766
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.766
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.871
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.831
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.886
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.782
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.864
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.766
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.750
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.789
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.766
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.774
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.864
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.810
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.871
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.893
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.788
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.793
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.752
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.803
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.886
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.771
P51992 Xenopus laevis P51992 I 0.768
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.814
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.710
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.886
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.814
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.786
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.766
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.886
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.750
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.700
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.736
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.771
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.864
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.850
AAA49741 Xenopus laevis AAA49741 I 0.793
AAA49742 Xenopus laevis AAA49742 I 0.793
P51968 Xenopus laevis P51968 I 0.779
P17130 Xenopus laevis P17130 I 0.793
CBU92546 Xenopus laevis CBU92546 I 0.807
CBU92451 Xenopus laevis CBU92451 I 0.768
CBU92428 Xenopus laevis CBU92428 I 0.793
CBF67672 Xenopus laevis CBF67672 I 0.807
CBF67578 Xenopus laevis CBF67578 I 0.768
CBF67555 Xenopus laevis CBF67555 I 0.793
AAI69881 Xenopus laevis AAI69881 I 0.768
AAH72090 Xenopus laevis AAH72090 I 0.807
AAH45260 Xenopus laevis AAH45260 I 0.814
AAA49950 Xenopus laevis AAA49950 I 0.768
AAA49949 Xenopus laevis AAA49949 I 0.779
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.886
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.836
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.766
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.766
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.843
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.793
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.829
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.807
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.716
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.829
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.829
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.725
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.766
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.766
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.886
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.886
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.702
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.857
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.764
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.886
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.807
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.700
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.721
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.718
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.857
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.764
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.886
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.838
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.719
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.743
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.714
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.886
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.719
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.857
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.703
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.796
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.804
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.803
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.796
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.738
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.755
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.814
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.803
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.759
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.821
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.766
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.710
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.761
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.807
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.700
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.714
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.748
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.837
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.879
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.864
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.814
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.817
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.782
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.864
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.814
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.783
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.717
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.824
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.843
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.803
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.782
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.701
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.796
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.821
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.775
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.755
LOC785445 Bos taurus ENSBTAG00000025621 I 0.864
LOC781499 Bos taurus ENSBTAG00000021580 I 0.766
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.733
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.886
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.779
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.817
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.814
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.871
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.722
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.731
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.734
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.818
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.830
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.850
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.707
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.814
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.886
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.829
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.743
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.797
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.871
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.851
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.800
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.718
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.738
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.886
HNRNPA3 Homo sapiens ENSG00000170144 I 0.766
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.771
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.886
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.821
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.728
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.757
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.771
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.871
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.857
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.771
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.886
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.766
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.843
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.879
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.748
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.857
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.814
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.821
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.729
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.893
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.786
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.717
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.714
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.766
LOC100066794 Equus caballus ENSECAG00000023237 I 0.771
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.886
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.871
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.766
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.807
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.886
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.886
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.779
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.850
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.717
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.829
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.836
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.843
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.871
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.738
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.864
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.829
LOC100054206 Equus caballus ENSECAG00000006699 I 0.831
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.807
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.766
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.886
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.729
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.750
zgc:66127 Danio rerio ENSDARG00000011020 I 0.714
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.871
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.766
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.773
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.836
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.886
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.779
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.750