TIAL1 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000017931 T42383_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.773
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.773
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000045966 RRM 31 70
ENSTRUP00000045966 RRM 72 119
ENSTRUP00000045966 RRM 139 209
ENSTRUP00000045966 RRM 247 311
ENSTRUP00000045967 RRM 12 51
ENSTRUP00000045967 RRM 60 104
ENSTRUP00000045967 RRM 124 194
ENSTRUP00000045967 RRM 232 296
ENSTRUP00000045968 RRM 10 93
ENSTRUP00000045968 RRM 113 183
ENSTRUP00000045968 RRM 221 285
ENSTRUP00000045969 RRM 1 40
ENSTRUP00000045969 RRM 60 130
ENSTRUP00000045969 RRM 168 232

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45086 Xenopus laevis AAH45086 N 0.730
AAH77169 Xenopus laevis AAH77169 I 0.745
AAH80105 Xenopus laevis AAH80105 I 0.750
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.768
Ame_R003219 Ailuropoda melanoleuca Ame_R003219 N 0.778
CAC95017 Xenopus laevis CAC95017 N 0.733
CAC95018 Xenopus laevis CAC95018 I 0.745
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.773
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.786
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.800
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.773
TIA1 Canis familiaris ENSCAFG00000003341 I 0.768
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.806
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.773
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.806
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.773
tial1 Danio rerio ENSDARG00000009525 I 0.809
tia1l Danio rerio ENSDARG00000026476 I 0.732
tia1 Danio rerio ENSDARG00000052536 I 0.750
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.768
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.718
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.761
TIAL1 Equus caballus ENSECAG00000009970 I 0.800
TIAL1 Erinaceus europaeus ENSEEUG00000011861 N 0.782
TIA1 Echinops telfairi ENSETEG00000010021 I 0.768
TIAL1 Echinops telfairi ENSETEG00000020276 N 0.765
TIA1 Homo sapiens ENSG00000116001 D 0.773
TIAL1 Homo sapiens ENSG00000151923 D 0.806
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.796
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.700
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.736
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.806
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.777
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.784
TIAL1 Loxodonta africana ENSLAFG00000003412 N 0.778
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.773
TIAL1 Macropus eugenii ENSMEUG00000013120 N 0.734
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.773
TIAL1 Meleagris gallopavo ENSMGAG00000011368 N 0.778
TIAL1 Myotis lucifugus ENSMLUG00000004645 N 0.738
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.773
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.806
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.806
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.773
Tial1 Mus musculus ENSMUSG00000030846 I 0.806
Tia1 Mus musculus ENSMUSG00000071337 I 0.777
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.807
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.795
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.773
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.773
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.703
TIA1 Oryzias latipes ENSORLG00000002529 I 0.736
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.800
TIA1 Oryzias latipes ENSORLG00000015642 I 0.750
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.802
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.806
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.768
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.806
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.773
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.768
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.806
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.773
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.806
TIA1 Sorex araneus ENSSARG00000001997 I 0.795
TIAL1 Sorex araneus ENSSARG00000012980 N 0.764
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.800
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.700
TIAL1 Taeniopygia guttata ENSTGUG00000011148 N 0.778
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.745
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.736
TIAL1 Tetraodon nigroviridis ENSTNIG00000013091 I 0.759
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.732
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.732
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.741
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.806
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.768
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.788
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.718
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.755
tial1 Xenopus tropicalis ENSXETG00000010234 N 0.764