Cucsa.356240 (Cucumis sativus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 Cucsa.356240 T62350_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.356240.1 YTH 370 460

Links

Other YTH family RBPs
Other Cucumis sativus RBPs

157 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA81375 Xenopus laevis AAA81375 I 0.000
AAH46942 Xenopus laevis AAH46942 I 0.000
AAH57704 Xenopus laevis AAH57704 I 0.000
AAH72134 Xenopus laevis AAH72134 I 0.000
ACH69785 Xenopus laevis ACH69785 I 0.000
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.000
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.000
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.000
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.000
BRUNOL5 Homo sapiens ENSG00000161082 D 0.000
BRUNOL6 Homo sapiens ENSG00000140488 D 0.000
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.000
Celf3 Mus musculus ENSMUSG00000028137 I 0.000
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.000
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.000
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.000
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.000
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.000
CELF3 Procavia capensis ENSPCAG00000001623 I 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.000
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.000
CELF3 Canis familiaris ENSCAFG00000012794 I 0.000
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.000
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.000
CELF3 Sus scrofa ENSSSCG00000006618 I 0.000
CELF3 Equus caballus ENSECAG00000020365 I 0.000
CELF3 Homo sapiens ENSG00000159409 I 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.000
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.000
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.000
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.000
Celf4 Mus musculus ENSMUSG00000024268 I 0.000
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.000
CELF4 Oryzias latipes ENSORLG00000008913 I 0.000
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.000
celf5 Danio rerio ENSDARG00000071375 I 0.000
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.000
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.000
CELF5 Oryzias latipes ENSORLG00000004600 I 0.000
CELF6 Sus scrofa ENSSSCG00000001928 I 0.000
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.000
CELF6 Bos taurus ENSBTAG00000014092 I 0.000
CELF6 Felis catus ENSFCAG00000016249 I 0.000
Celf6 Mus musculus ENSMUSG00000032297 I 0.000
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.000
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.000
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.000
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.000
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.000
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.000
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.000
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.000
HEXA Macaca mulatta ENSMMUG00000010687 I 0.000
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.000
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.000
Q91579 Xenopus laevis Q91579 I 0.000
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.000