ENSMODG00000006291 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000006291 T39092_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.883
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.883
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.883
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.876
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.703
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000007804 RRM 14 82
ENSMODP00000007804 RRM 104 177

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

241 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.774
AAA49742 Xenopus laevis AAA49742 I 0.774
AAA49949 Xenopus laevis AAA49949 I 0.740
AAA49950 Xenopus laevis AAA49950 I 0.730
AAH45260 Xenopus laevis AAH45260 I 0.788
AAH72090 Xenopus laevis AAH72090 I 0.788
AAI69881 Xenopus laevis AAI69881 I 0.730
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.863
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.781
CBF67555 Xenopus laevis CBF67555 I 0.774
CBF67578 Xenopus laevis CBF67578 I 0.730
CBF67672 Xenopus laevis CBF67672 I 0.788
CBU92428 Xenopus laevis CBU92428 I 0.774
CBU92451 Xenopus laevis CBU92451 I 0.730
CBU92546 Xenopus laevis CBU92546 I 0.788
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.849
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.747
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.863
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.714
LOC781499 Bos taurus ENSBTAG00000021580 I 0.741
LOC785445 Bos taurus ENSBTAG00000025621 I 0.815
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.764
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.725
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.819
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.781
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.819
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.757
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.812
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.819
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.822
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.801
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.781
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.814
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.753
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.795
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.708
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.863
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.788
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.750
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.829
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.776
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.841
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.728
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.766
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.753
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.767
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.707
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.856
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.854
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.747
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.741
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.736
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.760
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.774
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.833
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.760
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.743
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.784
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.747
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.819
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.730
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.733
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.728
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.840
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.855
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.847
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.740
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.829
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.750
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.799
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.807
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.788
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.795
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.804
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.874
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.774
ENSCJAG00000002606 Callithrix jacchus ENSCJAG00000002606 I 0.719
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.842
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.856
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.808
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.745
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.743
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.781
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.709
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.760
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.701
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.849
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.808
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.808
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.801
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.712
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.795
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.753
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.863
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.863
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.781
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.741
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.836
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.836
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.801
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.719
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.774
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.863
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.801
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.741
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.741
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.842
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.726
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.863
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.741
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.774
LOC100054206 Equus caballus ENSECAG00000006699 I 0.847
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.863
LOC100066794 Equus caballus ENSECAG00000023237 I 0.747
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.822
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.849
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.747
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.733
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.733
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.788
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.705
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.863
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.740
HNRNPA1 Homo sapiens ENSG00000135486 D 0.863
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.856
HNRNPA3 Homo sapiens ENSG00000170144 I 0.741
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.863
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.726
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.774
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.740
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.863
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.741
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.705
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.747
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.849
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.774
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.706
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.760
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.836
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.759
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.856
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.822
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.741
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.823
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.740
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.812
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.863
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.840
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.849
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.741
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.741
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.748
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.747
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.733
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.788
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.856
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.842
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.786
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.753
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.863
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.819
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.748
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.753
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.762
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.856
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.863
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.819
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.808
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.733
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.741
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.826
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.836
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.863
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.741
Gm8991 Mus musculus ENSMUSG00000059179 I 0.740
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.735
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.849
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.863
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.829
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.863
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.856
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.801
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.836
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.849
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.856
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.863
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.856
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.721
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.842
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.753
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.856
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.760
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.771
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.707
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.733
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.701
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.829
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.863
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.741
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.863
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.863
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.863
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.863
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.741
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.741
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.815
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.795
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.781
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.808
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.740
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.822
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.741
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.717
ENSRNOG00000029434 Rattus norvegicus ENSRNOG00000029434 I 0.705
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.836
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.719
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.741
D4AB76_RAT Rattus norvegicus ENSRNOG00000032584 I 0.705
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.829
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.863
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.733
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.829
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.771
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.774
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.863
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.753
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.741
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.781
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.863
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.815
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.829
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.740
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.719
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.733
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.863
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.741
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.747
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.795
P17130 Xenopus laevis P17130 I 0.774
P51968 Xenopus laevis P51968 I 0.740
P51992 Xenopus laevis P51992 I 0.730