LOC_Os05g01520 (Oryza sativa)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 LOC_Os05g01520 T62231_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g01520.1 YTH 486 576

Links

Other YTH family RBPs
Other Oryza sativa RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB01016.1 Alternaria brassicicola AB01016.1 N 0.000
ARB_00799 Arthroderma benhamiae ARB_00799 N 0.000
BC1G_02626 Botrytis cinerea BC1G_02626 N 0.000
BDBG_01534 Blastomyces dermatitidis BDBG_01534 N 0.000
ACLA_003080 Aspergillus clavatus CADACLAG00000382 N 0.000
AFLA_003900 Aspergillus flavus CADAFLAG00010456 N 0.000
AFUA_5G02160 Aspergillus fumigatus CADAFUAG00002676 N 0.000
An02g10780 Aspergillus niger CADANGAG00002596 N 0.000
ANIA_08055 Aspergillus nidulans CADANIAG00004081 N 0.000
AO090102000274 Aspergillus oryzae CADAORAG00009617 N 0.000
ATEG_09171 Aspergillus terreus CADATEAG00003372 N 0.000
NFIA_039950 Neosartorya fischeri CADNFIAG00002962 N 0.000
CHGG_07745 Chaetomium globosum CHGG_07745 N 0.000
CIMG_06432 Coccidioides immitis CIMG_06432 N 0.000
CPAG_02028 Candida parapsilosis CPAG_02028 N 0.000
CPSG_00638 Coccidioides posadasii CPSG_00638 N 0.000
EAT77189.2 Phaeosphaeria nodorum EAT77189.2 N 0.000
estExt_fgenesh1_pm.C_10481 Trichoderma reesei estExt_fgenesh1_pm.C_10481 N 0.000
estExt_fgenesh1_pm.C_30636 Myceliophthora thermophila estExt_fgenesh1_pm.C_30636 N 0.000
estExt_fgenesh1_pm.C_chr_80348 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_80348 N 0.000
estExt_fgenesh2_pm.C_20549 Thielavia terrestris estExt_fgenesh2_pm.C_20549 N 0.000
estExt_Genewise1.C_11720 Neurospora discreta estExt_Genewise1.C_11720 N 0.000
estExt_Genewise1.C_50445 Mycosphaerella fijiensis estExt_Genewise1.C_50445 N 0.000
estExt_Genewise1.C_70493 Cochliobolus heterostrophus C5 estExt_Genewise1.C_70493 N 0.000
estExt_Genewise1.C_sca_6_chr9_2_00515 Nectria haematococca estExt_Genewise1.C_sca_6_chr9_2_00515 N 0.000
estExt_Genewise1Plus.C_130308 Cryphonectria parasitica estExt_Genewise1Plus.C_130308 N 0.000
e_gw1.4.1358.1 Trichoderma virens e_gw1.4.1358.1 N 0.000
fgenesh1_pm.00866_#_655 Aspergillus carbonarius fgenesh1_pm.00866_#_655 N 0.000
fgenesh1_pm.C_scaffold_1000366 Trichoderma atroviride fgenesh1_pm.C_scaffold_1000366 N 0.000
FOXG_02027 Fusarium oxysporum FOXG_02027 N 0.000
FVEG_05191 Fusarium verticillioides FVEG_05191 N 0.000
GLRG_04960 Colletotrichum graminicola GLRG_04960 N 0.000
GSTUMT00003821001 Tuber melanosporum GSTUMT00003821001 N 0.000
MCYG_02047 Microsporum canis MCYG_02047 N 0.000
MGG_07327 Magnaporthe oryzae MGG_07327 N 0.000
MGYG_04027 Microsporum gypseum MGYG_04027 N 0.000
NCU06684 Neurospora crassa NCU06684 N 0.000
PABG_00314 Paracoccidioides brasiliensis PABG_00314 N 0.000
Pa_2_11350 Podospora anserina Pa_2_11350 N 0.000
Pc21g14870 Penicillium chrysogenum Pc21g14870 N 0.000
PMAA_081320 Penicillium marneffei PMAA_081320 N 0.000
PTRG_11004 Pyrenophora tritici repentis PTRG_11004 N 0.000
SNOG_15524 Stagonospora nodorum SNOG_15524 N 0.000
SS1G_01772 Sclerotinia sclerotiorum SS1G_01772 N 0.000
TEQG_06114 Trichophyton equinum TEQG_06114 N 0.000
TERG_04360 Trichophyton rubrum TERG_04360 N 0.000
TESG_06793 Trichophyton tonsurans TESG_06793 N 0.000
TRV_00689 Trichophyton verrucosum TRV_00689 N 0.000
UREG_03978 Uncinocarpus reesii UREG_03978 N 0.000
VDAG_01381 Verticillium dahliae VDAG_01381 N 0.000
YALI0F21835g Yarrowia lipolytica YALI0F21835g N 0.000