Cucsa.142200 (Cucumis sativus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 Cucsa.142200 T62347_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.142200.1 YTH 508 598
Cucsa.142200.2 YTH 507 597
Cucsa.142200.3 YTH 507 597
Cucsa.142200.4 YTH 508 596
Cucsa.142200.5 YTH 478 568
Cucsa.142200.6 YTH 508 598
Cucsa.142200.7 YTH 439 529
Cucsa.142200.8 YTH 439 529

Links

Other YTH family RBPs
Other Cucumis sativus RBPs

167 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
zff9 Danio rerio ENSDARG00000045776 N 0.000
cnbp Danio rerio ENSDARG00000070922 N 0.000
ZCCHC13 Gasterosteus aculeatus ENSGACG00000000061 N 0.000
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.000
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.000