CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Glyma15g41960.1
(
Glycine max
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
Glyma15g41960.1
T62405_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma15g41960.1
YTH
422
512
LFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTSSRDTQEVSFPQGVEMLNIFKNY
Links
Other
YTH
family RBPs
Other
Glycine max
RBPs
141 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN16829
Caenorhabditis brenneri
CBN16829
N
0.000
CRE11521
Caenorhabditis remanei
CRE11521
N
0.000
rnp-2
Caenorhabditis elegans
K08D10.4
N
0.000