BRADI1G64100 (Brachypodium distachyon)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BRADI1G64100 T61951_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G64100.1 YTH 347 437

Links

Other YTH family RBPs
Other Brachypodium distachyon RBPs

162 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002885156.1 Arabidopsis lyrata Al_scaffold_0003_1823 N 0.780
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.758
XM_002887730.1 Arabidopsis lyrata fgenesh2_kg.2__2224__AT1G79270.1 N 0.714
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.780
ECT3 Arabidopsis thaliana AT5G61020-TAIR-G N 0.703
ECT6 Arabidopsis thaliana AT3G17330-TAIR-G N 0.791
ECT8 Arabidopsis thaliana AT1G79270-TAIR-G N 0.714
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.780
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.758
BRADI2G12380 Brachypodium distachyon BRADI2G12380 N 0.769
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.725
BRADI3G42640 Brachypodium distachyon BRADI3G42640 N 0.714
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.725
BRADI2G46590 Brachypodium distachyon BRADI2G46590 N 0.758
PK02315.1 Cannabis sativa PK02315.1 N 0.824
PK05579.1 Cannabis sativa PK05579.1 N 0.736
PK17832.1 Cannabis sativa PK17832.1 N 0.769
PK23104.1 Cannabis sativa PK23104.1 N 0.747
PK01736.1 Cannabis sativa PK01736.1 N 0.714
PK26094.1 Cannabis sativa PK26094.1 N 0.725
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.736
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.846
Cucsa.142200 Cucumis sativus Cucsa.142200 N 0.714
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.824
Glyma15g41960.1 Glycine max Glyma15g41960.1 N 0.714
Glyma15g14490.1 Glycine max Glyma15g14490.1 N 0.791
Glyma09g03590.1 Glycine max Glyma09g03590.1 N 0.791
Glyma08g24210.1 Glycine max Glyma08g24210.1 N 0.747
Glyma07g00280.1 Glycine max Glyma07g00280.1 N 0.747
Glyma07g36110.1 Glycine max Glyma07g36110.1 N 0.802
Glyma08g17240.1 Glycine max Glyma08g17240.1 N 0.714
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.824
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.758
LjSGA_032005.1 Lotus japonicus LjSGA_032005.1 N 0.703
LjT10H22.120.nd Lotus japonicus LjT10H22.120.nd N 0.736
chr3.CM0292.380.nc Lotus japonicus chr3.CM0292.380.nc N 0.758
MDP0000248088 Malus x domestica MDP0000248088 N 0.747
MDP0000199885 Malus x domestica MDP0000199885 N 0.747
MDP0000132385 Malus x domestica MDP0000132385 N 0.791
MDP0000617859 Malus x domestica MDP0000617859 N 0.758
MDP0000552419 Malus x domestica MDP0000552419 N 0.747
MDP0000488248 Malus x domestica MDP0000488248 N 0.714
MDP0000405927 Malus x domestica MDP0000405927 N 0.758
MDP0000306387 Malus x domestica MDP0000306387 N 0.791
MDP0000287088 Malus x domestica MDP0000287088 N 0.758
MDP0000171737 Malus x domestica MDP0000171737 N 0.747
MDP0000231231 Malus x domestica MDP0000231231 N 0.747
MDP0000256033 Malus x domestica MDP0000256033 N 0.736
MDP0000286471 Malus x domestica MDP0000286471 N 0.747
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.703
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.703
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.703
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.703
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.703
cassava20495.m1 Manihot esculenta cassava20495.m1 N 0.703
cassava20494.m1 Manihot esculenta cassava20494.m1 N 0.703
cassava1918.valid.m1 Manihot esculenta cassava1918.valid.m1 N 0.758
cassava1917.valid.m1 Manihot esculenta cassava1917.valid.m1 N 0.758
cassava18205.valid.m1 Manihot esculenta cassava18205.valid.m1 N 0.703
cassava1916.valid.m1 Manihot esculenta cassava1916.valid.m1 N 0.758
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.703
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.703
cassava6538.valid.m1 Manihot esculenta cassava6538.valid.m1 N 0.725
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.846
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.846
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.703
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.703
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.703
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.703
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.703
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.703
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.703
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.703
cassava18204.valid.m1 Manihot esculenta cassava18204.valid.m1 N 0.703
cassava18203.valid.m1 Manihot esculenta cassava18203.valid.m1 N 0.703
cassava17772.valid.m1 Manihot esculenta cassava17772.valid.m1 N 0.758
cassava12061.valid.m1 Manihot esculenta cassava12061.valid.m1 N 0.725
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.703
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.703
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.703
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.703
cassava13322.valid.m1 Manihot esculenta cassava13322.valid.m1 N 0.736
cassava13323.valid.m1 Manihot esculenta cassava13323.valid.m1 N 0.736
cassava13324.valid.m1 Manihot esculenta cassava13324.valid.m1 N 0.736
cassava14932.m1 Manihot esculenta cassava14932.m1 N 0.736
cassava17771.valid.m1 Manihot esculenta cassava17771.valid.m1 N 0.758
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.824
Medtr2g085380 Medicago truncatula Medtr2g085380 N 0.736
Medtr2g036990 Medicago truncatula Medtr2g036990 N 0.802
Medtr4g163280 Medicago truncatula Medtr4g163280 N 0.758
mgf013935m Mimulus guttatus mgf013935m N 0.703
mgf014143m Mimulus guttatus mgf014143m N 0.835
mgf014829m Mimulus guttatus mgf014829m N 0.714
mgf017987m Mimulus guttatus mgf017987m N 0.824
mgf019821m Mimulus guttatus mgf019821m N 0.725
mgf013853m Mimulus guttatus mgf013853m N 0.703
mgf015583m Mimulus guttatus mgf015583m N 0.835
mgf009938m Mimulus guttatus mgf009938m N 0.703
mgf001716m Mimulus guttatus mgf001716m N 0.714
BGIOSIBCE003171 Oryza indica BGIOSIBCE003171 N 0.758
BGIOSIBCE009738 Oryza indica BGIOSIBCE009738 N 0.703
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.934
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.714
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.736
BGIOSIBCE028829 Oryza indica BGIOSIBCE028829 N 0.725
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.934
LOC_Os08g44200 Oryza sativa LOC_Os08g44200 N 0.725
LOC_Os01g22630 Oryza sativa LOC_Os01g22630 N 0.769
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.703
LOC_Os03g06240 Oryza sativa LOC_Os03g06240 N 0.703
LOC_Os01g48790 Oryza sativa LOC_Os01g48790 N 0.758
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.758
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.736
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.725
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.879
PDK_20s1631851g001 Phoenix dactylifera PDK_20s1631851g001 N 0.725
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.758
gw1.181.55.1 Physcomitrella patens gw1.181.55.1 N 0.714
B9GMK5_POPTR Populus trichocarpa POPTR_0001s13870 N 0.747
B9HBC4_POPTR Populus trichocarpa POPTR_0006s07970 N 0.703
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.736
B9N817_POPTR Populus trichocarpa POPTR_0018s14670 N 0.703
B9N770_POPTR Populus trichocarpa POPTR_0022s00680 N 0.703
B9HYD4_POPTR Populus trichocarpa POPTR_0010s18300 N 0.725
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.736
B9HX84_POPTR Populus trichocarpa POPTR_0010s16210 N 0.813
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.824
B9HI18_POPTR Populus trichocarpa POPTR_0008s08030 N 0.747
ppa018635m Prunus persica ppa018635m N 0.824
ppa002483m Prunus persica ppa002483m N 0.769
ppa002588m Prunus persica ppa002588m N 0.769
ppa002677m Prunus persica ppa002677m N 0.703
ppa003557m Prunus persica ppa003557m N 0.714
ppa003664m Prunus persica ppa003664m N 0.758
29955.m001158 Ricinus communis 29955.m001158 N 0.747
29889.m003364 Ricinus communis 29889.m003364 N 0.813
29765.m000746 Ricinus communis 29765.m000746 N 0.703
29929.m004643 Ricinus communis 29929.m004643 N 0.736
29890.m000285 Ricinus communis 29890.m000285 N 0.703
SB07G006330 Sorghum bicolor Sb07g006330 N 0.736
SB07G000670 Sorghum bicolor Sb07g000670 N 0.725
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.725
SB03G031190 Sorghum bicolor Sb03g031190 N 0.747
SB06G027960 Sorghum bicolor Sb06g027960 N 0.725
SB09G004590 Sorghum bicolor Sb09g004590 N 0.714
SB07G024500 Sorghum bicolor Sb07g024500 N 0.725
GSVIVG00010494001 Vitis vinifera GSVIVG00010494001 N 0.703
GSVIVG00036696001 Vitis vinifera GSVIVG00036696001 N 0.736
GSVIVG00029460001 Vitis vinifera GSVIVG00029460001 N 0.736
GSVIVG00025494001 Vitis vinifera GSVIVG00025494001 N 0.714
GSVIVG00023248001 Vitis vinifera GSVIVG00023248001 N 0.714
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.835
GSVIVG00032236001 Vitis vinifera GSVIVG00032236001 N 0.736
GRMZM2G056573 Zea mays GRMZM2G056573 N 0.725
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.725
GRMZM2G098174 Zea mays GRMZM2G098174 N 0.703
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.703
GRMZM2G127780 Zea mays GRMZM2G127780 N 0.747
GRMZM2G169116 Zea mays GRMZM2G169116 N 0.747
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.725
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.714
GRMZM2G025488 Zea mays GRMZM2G025488 N 0.725