HNRNPA3 (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000010380 T40919_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.879
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.879
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.879
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.857
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.800
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000009782 RRM 37 106
ENSPVAP00000009782 RRM 128 197

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

292 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.851
HNRNPA1 Homo sapiens ENSG00000135486 D 0.872
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.733
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.837
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.872
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.830
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.733
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.950
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.811
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.830
HNRNPA2B1 Ochotona princeps ENSOPRG00000011698 I 0.000
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.865
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.000
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 1.000
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.733
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 1.000
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.796
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.703
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.733
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.830
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 1.000
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.733
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.872
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.872
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.872
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.872
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.851
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.000
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 1.000
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.872
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.851
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.733
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.762
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 1.000
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.733
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.851
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.872
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.714
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.712
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.872
Gm8991 Mus musculus ENSMUSG00000059179 I 0.972
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.733
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.858
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.733
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.872
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.865
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.858
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.844
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.865
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.858
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.851
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.872
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.865
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.993
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.000
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.957
P51992 Xenopus laevis P51992 I 0.923
AAH72090 Xenopus laevis AAH72090 I 0.837
AAH46692 Xenopus laevis AAH46692 I 0.726
AAH45260 Xenopus laevis AAH45260 I 0.837
AAH43750 Xenopus laevis AAH43750 I 0.712
AAB59951 Xenopus laevis AAB59951 I 0.712
AAA49950 Xenopus laevis AAA49950 I 0.923
AAA49949 Xenopus laevis AAA49949 I 0.936
AAA49948 Xenopus laevis AAA49948 I 0.726
AAA49742 Xenopus laevis AAA49742 I 0.823
AAA49741 Xenopus laevis AAA49741 I 0.823
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.872
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.733
AAI06633 Xenopus laevis AAI06633 I 0.712
AAI69881 Xenopus laevis AAI69881 I 0.923
P51990 Xenopus laevis P51990 I 0.712
P51989 Xenopus laevis P51989 I 0.726
P51968 Xenopus laevis P51968 I 0.936
P17130 Xenopus laevis P17130 I 0.823
CBU92546 Xenopus laevis CBU92546 I 0.837
CBU92451 Xenopus laevis CBU92451 I 0.923
CBU92450 Xenopus laevis CBU92450 I 0.726
CBU92428 Xenopus laevis CBU92428 I 0.823
CBF67672 Xenopus laevis CBF67672 I 0.837
CBF67578 Xenopus laevis CBF67578 I 0.923
CBF67577 Xenopus laevis CBF67577 I 0.726
CBF67555 Xenopus laevis CBF67555 I 0.823
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.844
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.719
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.000
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 1.000
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.719
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.000
ENSSSCG00000013561 Sus scrofa ENSSSCG00000013561 I 0.000
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.000
ENSSSCG00000012503 Sus scrofa ENSSSCG00000012503 I 0.000
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.872
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.794
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.837
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.965
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.872
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.733
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.726
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.943
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.000
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 1.000
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.872
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.733
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.823
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.823
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.972
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.733
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.824
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.872
HNRNPA2B1 Tupaia belangeri ENSTBEG00000003219 I 0.000
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.818
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.705
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.872
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.844
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.769
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.785
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.776
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.762
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.000
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.757
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.790
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.733
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 1.000
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.000
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.757
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.726
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.796
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.872
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.803
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.816
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.851
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.930
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.733
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.715
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.817
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.865
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.851
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.797
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.797
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.858
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.717
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.703
LOC538435 Bos taurus ENSBTAG00000038680 I 0.000
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
LOC781499 Bos taurus ENSBTAG00000021580 I 1.000
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.000
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.000
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.733
LOC516616 Bos taurus ENSBTAG00000002284 I 0.000
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.872
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.726
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.979
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.755
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.733
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.748
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.705
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.736
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.771
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.830
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.872
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.823
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.710
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.743
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.830
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.776
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.000
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.879
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.851
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 1.000
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.733
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.837
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.879
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.858
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.879
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.858
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.733
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 1.000
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.872
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.733
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.733
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.865
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.972
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.865
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.817
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.000
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.733
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 1.000
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.733
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 1.000
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.858
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.790
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.872
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.733
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.972
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.837
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.872
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 1.000
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.733
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.872
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.844
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.851
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 1.000
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.993
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.872
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.816
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.844
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.851
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 1.000
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.733
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.794
HNRNPA3 Homo sapiens ENSG00000170144 I 1.000
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.979
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.872
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.733
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.733
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.858
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.830
LOC100066794 Equus caballus ENSECAG00000023237 I 0.979
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.872
LOC100054206 Equus caballus ENSECAG00000006699 I 0.783
LOC100068539 Equus caballus ENSECAG00000000782 I 0.733
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.733
HNRNPA2B1 Tarsius syrichta ENSTSYG00000008124 N 0.000