ENSMICG00000009289 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000009289 T38533_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.900
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.900
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.900
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.886
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.729
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000008460 RRM 16 81
ENSMICP00000008460 RRM 106 175

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

250 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.789
AAA49742 Xenopus laevis AAA49742 I 0.789
AAA49949 Xenopus laevis AAA49949 I 0.754
AAA49950 Xenopus laevis AAA49950 I 0.743
AAH45260 Xenopus laevis AAH45260 I 0.803
AAH72090 Xenopus laevis AAH72090 I 0.803
AAI69881 Xenopus laevis AAI69881 I 0.743
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.866
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.782
CBF67555 Xenopus laevis CBF67555 I 0.789
CBF67578 Xenopus laevis CBF67578 I 0.743
CBF67672 Xenopus laevis CBF67672 I 0.803
CBU92428 Xenopus laevis CBU92428 I 0.789
CBU92451 Xenopus laevis CBU92451 I 0.743
CBU92546 Xenopus laevis CBU92546 I 0.803
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.859
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.768
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.866
LOC781499 Bos taurus ENSBTAG00000021580 I 0.762
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.726
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.842
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.782
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.000
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.827
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.843
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.824
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.848
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.768
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.823
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.729
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.810
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.866
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.789
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.740
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.824
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.785
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.830
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.743
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.780
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.729
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.755
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.852
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.857
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.736
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.762
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.761
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.778
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.843
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.770
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.767
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.736
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.821
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.705
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.721
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.871
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.849
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.764
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.845
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.784
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.820
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.837
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.789
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.803
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.771
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.850
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.796
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.845
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.859
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.831
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.734
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.704
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.789
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.710
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.768
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.720
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.852
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.803
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.810
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.803
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.796
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.775
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.866
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.866
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.775
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.762
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.845
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.838
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.810
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.739
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.782
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.866
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.817
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.762
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.762
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.838
zgc:66127 Danio rerio ENSDARG00000011020 I 0.718
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.739
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.711
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.866
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.762
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.782
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.000
LOC100054206 Equus caballus ENSECAG00000006699 I 0.864
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.866
LOC100066794 Equus caballus ENSECAG00000023237 I 0.761
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.831
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.852
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.746
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.739
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.703
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.816
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.866
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.761
HNRNPA1 Homo sapiens ENSG00000135486 D 0.866
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.852
HNRNPA3 Homo sapiens ENSG00000170144 I 0.762
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.866
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.715
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.000
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.782
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.768
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.866
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.762
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.704
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.754
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.866
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.725
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.789
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.775
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.852
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.000
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.780
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.866
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.824
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.762
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.832
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.768
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.866
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.850
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.852
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.762
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.762
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.738
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.729
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.000
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.796
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.859
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.764
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.746
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.866
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.835
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.755
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.775
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.752
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.859
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.859
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.843
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.796
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.812
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.762
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.807
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.838
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.866
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.762
Gm8991 Mus musculus ENSMUSG00000059179 I 0.761
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.755
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.852
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.866
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.852
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.852
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.859
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.817
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.852
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.852
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.859
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.866
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.852
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.852
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.715
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.859
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.768
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.000
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.779
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.720
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.736
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.727
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.859
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.866
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.762
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.725
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.866
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.866
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.866
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.762
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.762
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.708
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.845
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.810
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.000
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.782
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.810
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.761
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.824
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.762
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.000
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.838
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.000
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.739
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.731
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.824
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.866
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.754
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.831
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.803
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.711
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.718
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.782
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.000
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.866
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.761
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.762
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.000
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.782
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.866
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.810
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.824
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.768
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.732
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.739
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.866
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.762
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.761
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.810
P17130 Xenopus laevis P17130 I 0.789
P51968 Xenopus laevis P51968 I 0.754
P51992 Xenopus laevis P51992 I 0.743