cassava35659.valid.m1 (Manihot esculenta)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 cassava35659.valid.m1 T62332_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava35659.valid.m1 YTH 465 555

Links

Other YTH family RBPs
Other Manihot esculenta RBPs

168 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_00209 Chaetomium globosum CHGG_00209 N 0.000
PTTG_08665 Puccinia triticina PTTG_08665 N 0.000
PTTG_08777 Puccinia triticina PTTG_08777 N 0.000
PTTG_09789 Puccinia triticina PTTG_09789 N 0.000
PTTG_10291 Puccinia triticina PTTG_10291 N 0.000
PTTG_10451 Puccinia triticina PTTG_10451 N 0.000
PTTG_10552 Puccinia triticina PTTG_10552 N 0.000
PTTG_10713 Puccinia triticina PTTG_10713 N 0.000
PTTG_10751 Puccinia triticina PTTG_10751 N 0.000
PTTG_11057 Puccinia triticina PTTG_11057 N 0.000
PTTG_11068 Puccinia triticina PTTG_11068 N 0.000
PTTG_11278 Puccinia triticina PTTG_11278 N 0.000
PTTG_11299 Puccinia triticina PTTG_11299 N 0.000
PTTG_11462 Puccinia triticina PTTG_11462 N 0.000
PTTG_11563 Puccinia triticina PTTG_11563 N 0.000
SB01G029366 Sorghum bicolor Sb01g029366 N 0.000
SB01G031795 Sorghum bicolor Sb01g031795 N 0.000
SB06G012571 Sorghum bicolor Sb06g012571 N 0.000
PTTG_08330 Puccinia triticina PTTG_08330 N 0.000
PTTG_07469 Puccinia triticina PTTG_07469 N 0.000
PTTG_07033 Puccinia triticina PTTG_07033 N 0.000
CHGG_02707 Chaetomium globosum CHGG_02707 N 0.000
PGTG_03172 Puccinia graminis PGTG_03172 N 0.000
PGTG_03348 Puccinia graminis PGTG_03348 N 0.000
PGTG_05307 Puccinia graminis PGTG_05307 N 0.000
PGTG_05406 Puccinia graminis PGTG_05406 N 0.000
PGTG_05408 Puccinia graminis PGTG_05408 N 0.000
PGTG_09834 Puccinia graminis PGTG_09834 N 0.000
PGTG_12045 Puccinia graminis PGTG_12045 N 0.000
PGTG_12646 Puccinia graminis PGTG_12646 N 0.000
PGTG_15116 Puccinia graminis PGTG_15116 N 0.000
PGTG_16335 Puccinia graminis PGTG_16335 N 0.000
PGTG_18613 Puccinia graminis PGTG_18613 N 0.000
PGTG_20442 Puccinia graminis PGTG_20442 N 0.000
PTTG_01306 Puccinia triticina PTTG_01306 N 0.000
PTTG_03874 Puccinia triticina PTTG_03874 N 0.000
PTTG_04497 Puccinia triticina PTTG_04497 N 0.000
PTTG_06752 Puccinia triticina PTTG_06752 N 0.000
SB08G020705 Sorghum bicolor Sb08g020705 N 0.000