ENSOANG00000010001 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000010001 T39526_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.928
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.889
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.889
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.889
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.824
pAbp
M130_0.6 		Drosophila melanogaster GAAAAHV RNAcompete
Ray et al.(2013)
RNCMPT00139 		0.703
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000015854 RRM 13 83
ENSOANP00000015854 RRM 101 169
ENSOANP00000015854 RRM 193 261
ENSOANP00000015854 RRM 296 364
ENSOANP00000015855 RRM 13 83
ENSOANP00000015855 RRM 101 169
ENSOANP00000015855 RRM 193 261
ENSOANP00000015855 RRM 296 364

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

183 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.000
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.000
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.000
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.000
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.000
SFPQ Bos taurus ENSBTAG00000016328 I 0.000
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.000
PSPC1 Canis familiaris ENSCAFG00000007365 N 0.000
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.000
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.000
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.000
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.000
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.000
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.000
pspc1 Danio rerio ENSDARG00000006621 N 0.000
sfpq Danio rerio ENSDARG00000011564 I 0.000
nono Danio rerio ENSDARG00000020482 I 0.000
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 N 0.000
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.000
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.000
LOC100069588 Equus caballus ENSECAG00000000642 I 0.000
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.000
SFPQ Echinops telfairi ENSETEG00000001095 I 0.000
PSPC1 Felis catus ENSFCAG00000013701 I 0.000
SFPQ Homo sapiens ENSG00000116560 D 0.000
PSPC1 Homo sapiens ENSG00000121390 I 0.000
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.000
PSPC1 Gasterosteus aculeatus ENSGACG00000014901 N 0.000
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.000
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.000
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.000
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.000
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.000
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.000
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.000
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.000
SFPQ Microcebus murinus ENSMICG00000011755 I 0.000
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.000
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.000
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.000
Pspc1 Mus musculus ENSMUSG00000021938 I 0.000
Sfpq Mus musculus ENSMUSG00000028820 I 0.000
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.000
ENSOANG00000011381 Ornithorhynchus anatinus ENSOANG00000011381 N 0.000
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.000
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.000
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.000
PSPC1 Oryzias latipes ENSORLG00000004232 N 0.000
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.000
SFPQ Procavia capensis ENSPCAG00000006164 I 0.000
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.000
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.000
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.000
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.000
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.000
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.000
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.000
PSPC1 Sorex araneus ENSSARG00000000888 I 0.000
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.000
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.000
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.000
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.000
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.000
PSPC1 Tetraodon nigroviridis ENSTNIG00000010358 N 0.000
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.000
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.000
PSPC1 Takifugu rubripes ENSTRUG00000011335 N 0.000
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.000
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.000
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.000
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.000
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.000