MDP0000286471 (Malus x domestica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 MDP0000286471 T62536_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000286471 YTH 421 511

Links

Other YTH family RBPs
Other Malus x domestica RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.000
amel4_ncbi_hmm3854 Apis mellifera amel4_ncbi_hmm3854 N 0.000
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.000
gw.348.48.1 Branchiostoma floridae gw.348.48.1 I 0.000
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.000
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.000
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.000
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.000
ENSCSAVG00000000864 Ciona savignyi ENSCSAVG00000000864 N 0.000
zranb2 Danio rerio ENSDARG00000044332 I 0.000
e_gw1.17.447.1 Daphnia pulex e_gw1.17.447.1 N 0.000
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.000
ENSETEG00000017849 Echinops telfairi ENSETEG00000017849 I 0.000
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.000
LOC100053515 Equus caballus ENSECAG00000014173 I 0.000
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.000
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.000
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.000
125254 Helobdella robusta 125254 I 0.000
ZRANB2 Homo sapiens ENSG00000132485 D 0.000
gw1.1.429.1 Lottia gigantea gw1.1.429.1 N 0.000
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.000
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.000
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.000
Zranb2 Mus musculus ENSMUSG00000028180 I 0.000
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.000
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.000
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.000
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.000
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.000
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.000
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.000
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.000
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.000
XP_785599.1 Strongylocentrotus purpuratus XP_785599.1 N 0.000
XP_001189132.1 Strongylocentrotus purpuratus XP_001189132.1 N 0.000
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.000
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.000
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.000
amel4_ncbi_hmm3854 Tribolium castaneum amel4_ncbi_hmm3854 N 0.000
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.000
ZRANB2 Vicugna pacos ENSVPAG00000002940 I 0.000
AAI33785 Xenopus laevis AAI33785 I 0.000
AAH84309 Xenopus laevis AAH84309 I 0.000
CAA65321 Xenopus laevis CAA65321 I 0.000
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.000