CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSVIVG00036696001
(
Vitis vinifera
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
GSVIVG00036696001
T62221_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSVIVT00036696001
YTH
433
523
LFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVTNSRDTQEVRFPQGIEILNIFKNY
Links
Other
YTH
family RBPs
Other
Vitis vinifera
RBPs
174 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG08763
Caenorhabditis briggsae
CBG08763
N
0.000
CJA09584
Caenorhabditis japonica
CJA09584
N
0.000
CJA12868
Caenorhabditis japonica
CJA12868
N
0.000
CRE03331
Caenorhabditis remanei
CRE03331
N
0.000
CRE06628
Caenorhabditis remanei
CRE06628
N
0.000
CRE29150
Caenorhabditis remanei
CRE29150
N
0.000