GSVIVG00036696001 (Vitis vinifera)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 GSVIVG00036696001 T62221_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00036696001 YTH 433 523

Links

Other YTH family RBPs
Other Vitis vinifera RBPs

174 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.000
Ame_R019118 Ailuropoda melanoleuca Ame_R019118 I 0.000
ENSACAG00000010019 Anolis carolinensis ENSACAG00000010019 I 0.000
XM_002886132.1 Arabidopsis lyrata fgenesh2_kg.3__3460__AT2G18510.1 I 0.000
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.000
estExt_fgenesh1_pm.C_120017 Batrachochytrium dendrobatidis estExt_fgenesh1_pm.C_120017 N 0.000
Q3MHE6_BOVIN Bos taurus ENSBTAG00000012495 I 0.000
estExt_fgenesh2_pm.C_9540001 Branchiostoma floridae estExt_fgenesh2_pm.C_9540001 I 0.000
fgenesh2_pg.scaffold_36000101 Branchiostoma floridae fgenesh2_pg.scaffold_36000101 I 0.000
A6MKC5_CALJA Callithrix jacchus ENSCJAG00000000793 I 0.000
ENSCAFG00000011617 Canis familiaris ENSCAFG00000011617 I 0.000
PK08238.1 Cannabis sativa PK08238.1 I 0.000
estExt_Genewise1.C_230076 Capitella teleta estExt_Genewise1.C_230076 I 0.000
ENSCPOG00000008267 Cavia porcellus ENSCPOG00000008267 I 0.000
FER_chlre3.3.376.1.5 Chlamydomonas reinhardtii FER_chlre3.3.376.1.5 I 0.000
gw1.3.260.1 Chlorella NC64A gw1.3.260.1 I 0.000
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.000
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.000
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.000
Cucsa.251850 Cucumis sativus Cucsa.251850 I 0.000
sf3b4 Danio rerio ENSDARG00000018574 D 0.000
LOC100054350 Equus caballus ENSECAG00000024737 I 0.000
ENSFCAG00000010106 Felis catus ENSFCAG00000010106 I 0.000
SF3B4 Gallus gallus ENSGALG00000013352 I 0.000
SF3B4 Gasterosteus aculeatus ENSGACG00000003819 I 0.000
Glyma12g36950.1 Glycine max Glyma12g36950.1 I 0.000
Glyma09g00310.1 Glycine max Glyma09g00310.1 I 0.000
SF3B4 Gorilla gorilla ENSGGOG00000004761 I 0.000
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.000
SF3B4 Homo sapiens ENSG00000143368 I 0.000
ISCW010601 Ixodes scapularis ISCW010601 I 0.000
estExt_Genewise1.C_sca_2060028 Lottia gigantea estExt_Genewise1.C_sca_2060028 I 0.000
ENSLAFG00000008531 Loxodonta africana ENSLAFG00000008531 I 0.000
SF3B4 Macaca mulatta ENSMMUG00000007256 I 0.000
MDP0000320945 Malus x domestica MDP0000320945 I 0.000
MDP0000131129 Malus x domestica MDP0000131129 I 0.000
cassava31033.valid.m1 Manihot esculenta cassava31033.valid.m1 I 0.000
Medtr3g087340 Medicago truncatula Medtr3g087340 I 0.000
ENSMGAG00000000653 Meleagris gallopavo ENSMGAG00000000653 I 0.000
SF3B4 Microcebus murinus ENSMICG00000000296 I 0.000
MCYG_05258 Microsporum canis MCYG_05258 N 0.000
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.000
ENSMODG00000018767 Monodelphis domestica ENSMODG00000018767 I 0.000
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.000
Sf3b4 Mus musculus ENSMUSG00000068856 I 0.000
ENSMLUG00000010789 Myotis lucifugus ENSMLUG00000010789 I 0.000
estExt_gwp.C_590193 Nematostella vectensis estExt_gwp.C_590193 I 0.000
ENSOPRG00000010808 Ochotona princeps ENSOPRG00000010808 I 0.000
ENSOCUG00000004614 Oryctolagus cuniculus ENSOCUG00000004614 I 0.000
SF3B4 Oryzias latipes ENSORLG00000003062 I 0.000
SF3B4 Otolemur garnettii ENSOGAG00000006265 I 0.000
SF3B4 Pan troglodytes ENSPTRG00000001243 I 0.000
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.000
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.000
B9HEU6_POPTR Populus trichocarpa POPTR_0007s12570 I 0.000
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.000
ENSPCAG00000000392 Procavia capensis ENSPCAG00000000392 I 0.000
ppa007508m Prunus persica ppa007508m I 0.000
ENSPVAG00000014171 Pteropus vampyrus ENSPVAG00000014171 I 0.000
Sf3b4 Rattus norvegicus ENSRNOG00000021181 I 0.000
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.000
Smp_067420 Schistosoma mansoni Smp_067420 D 0.000
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.000
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.000
XP_001185838.1 Strongylocentrotus purpuratus XP_001185838.1 I 0.000
XP_784135.2 Strongylocentrotus purpuratus XP_784135.2 I 0.000
ENSSSCG00000006665 Sus scrofa ENSSSCG00000006665 I 0.000
SF3B4 Taeniopygia guttata ENSTGUG00000004470 I 0.000
SF3B4 Takifugu rubripes ENSTRUG00000004516 I 0.000
SF3B4 Tarsius syrichta ENSTSYG00000009295 I 0.000
SF3B4 Tetraodon nigroviridis ENSTNIG00000009156 I 0.000
TERG_06435 Trichophyton rubrum TERG_06435 N 0.000
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.000
ENSTTRG00000005217 Tursiops truncatus ENSTTRG00000005217 I 0.000
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.000
ENSVPAG00000008152 Vicugna pacos ENSVPAG00000008152 I 0.000
GSVIVG00018991001 Vitis vinifera GSVIVG00018991001 I 0.000
AAH45264 Xenopus laevis AAH45264 I 0.000
AAH77458 Xenopus laevis AAH77458 I 0.000
sf3b4 Xenopus tropicalis ENSXETG00000011038 I 0.000