ENSCAFG00000020238 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000020238 T35203_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.929
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.929
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.929
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.907
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000002902 RRM 16 82
ENSCAFP00000002902 RRM 105 174

Links

Other RRM family RBPs
Other Canis familiaris RBPs

304 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45260 Xenopus laevis AAH45260 I 0.817
AAH72090 Xenopus laevis AAH72090 I 0.817
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.708
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.894
CBF67672 Xenopus laevis CBF67672 I 0.817
CBU92546 Xenopus laevis CBU92546 I 0.817
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.880
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.894
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.708
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.715
ENSBTAG00000021755 Bos taurus ENSBTAG00000021755 I 0.000
LOC785445 Bos taurus ENSBTAG00000025621 I 0.845
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.767
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.735
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.884
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.803
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.708
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.740
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.871
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.871
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.908
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.851
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.803
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.837
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.743
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.824
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.894
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.810
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.760
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.894
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.792
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.865
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.823
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.778
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.724
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.894
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.900
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.750
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.799
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.907
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.810
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.795
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.750
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.850
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.733
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.928
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.000
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.769
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.859
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.727
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.856
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.851
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.824
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.879
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.803
ENSCJAG00000002606 Callithrix jacchus ENSCJAG00000002606 I 0.708
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.880
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.887
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.838
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.776
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.753
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.831
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.745
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.708
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.880
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.838
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.838
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.831
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.739
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.824
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.796
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.894
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.894
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.810
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.708
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.866
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.873
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.838
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.746
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.796
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.894
ENSCJAG00000034743 Callithrix jacchus ENSCJAG00000034743 I 0.000
ENSCJAG00000034783 Callithrix jacchus ENSCJAG00000034783 I 0.000
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.845
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.866
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.894
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.708
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.708
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.824
LOC100068539 Equus caballus ENSECAG00000000782 I 0.708
LOC100054206 Equus caballus ENSECAG00000006699 I 0.871
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.894
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.859
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.880
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.810
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.715
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.708
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.894
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.708
HNRNPA1 Homo sapiens ENSG00000135486 D 0.894
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.873
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.894
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.757
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.803
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.708
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.894
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.708
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.713
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.743
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.782
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.880
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.803
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.720
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.796
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.708
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.866
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.887
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.859
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.708
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.708
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.853
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.708
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.849
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.724
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.894
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.871
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.880
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.708
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.708
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.757
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.748
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.817
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.901
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.873
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.790
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.780
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.894
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.862
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.776
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.772
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.887
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.880
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.836
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.824
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.708
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.847
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.843
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.708
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.873
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.894
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.708
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.880
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.894
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.859
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.880
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.887
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.831
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.866
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.880
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.887
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.894
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.708
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.880
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.710
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.873
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.764
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.887
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.743
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.708
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.859
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.894
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.708
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.894
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.894
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.894
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.894
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.708
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.838
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.708
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.852
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.845
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.859
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.752
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.852
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.894
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.859
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.824
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.894
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.000
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.708
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.803
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.894
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.838
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.852
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.715
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.708
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.894
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.824