CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PDK_20s1308332g001
(
Phoenix dactylifera
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
PDK_20s1308332g001
T62551_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1308332g001
YTH
378
468
LFFSVNTSGQFVGVAEMVGPVDFNKTVDYWQQDKWNGCFPVKWHIVKDVPNGFLKHITLENNDNKPVTNSRDTQEVKLEQGLQILKLFKDH
Links
Other
YTH
family RBPs
Other
Phoenix dactylifera
RBPs
191 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM34
Anolis carolinensis
ENSACAG00000001253
N
0.000
Rbm34
Mus musculus
ENSMUSG00000033931
N
0.000
RBM34
Ornithorhynchus anatinus
ENSOANG00000001206
N
0.000
RBM34
Oryctolagus cuniculus
ENSOCUG00000009173
N
0.000
RBM34
Ochotona princeps
ENSOPRG00000013930
N
0.000
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.000
RBM34
Pteropus vampyrus
ENSPVAG00000015158
N
0.000
Rbm34
Rattus norvegicus
ENSRNOG00000020004
N
0.000
D3ZPK9_RAT
Rattus norvegicus
ENSRNOG00000023341
N
0.000
RBM34
Sus scrofa
ENSSSCG00000010157
N
0.000
RBM34
Tursiops truncatus
ENSTTRG00000002216
N
0.000
RBM34
Monodelphis domestica
ENSMODG00000008436
N
0.000
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.000
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.000
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.000
RBM34
Cavia porcellus
ENSCPOG00000015213
N
0.000
Rbm34
Dipodomys ordii
ENSDORG00000006420
N
0.000
LOC100146167
Equus caballus
ENSECAG00000013333
N
0.000
RBM34
Felis catus
ENSFCAG00000001852
N
0.000
RBM34
Homo sapiens
ENSG00000188739
N
0.000
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.000
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.000
RBM34
Myotis lucifugus
ENSMLUG00000016224
N
0.000
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.000