ENSEEUG00000000494 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000000494 T36730_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.950
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.950
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.950
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.929
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000000439 RRM 16 85
ENSEEUP00000000439 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

309 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.950
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.936
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.950
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.733
LOC785445 Bos taurus ENSBTAG00000025621 I 0.894
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.901
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.762
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.851
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.785
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.929
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.943
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.929
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.844
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.866
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.796
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.887
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.783
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.893
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.887
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.872
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.950
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.857
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.900
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.921
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.921
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.872
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.950
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.879
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.887
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.823
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.950
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.859
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.752
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.921
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.731
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.810
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.859
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.832
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.844
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.860
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.782
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.865
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.950
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.879
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.785
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.825
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.844
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.838
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.921
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.859
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.838
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.741
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.845
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.865
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.838
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.730
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.755
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.914
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.838
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.838
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.735
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.838
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.752
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.810
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.851
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.807
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.851
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.766
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.846
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.760
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.772
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.771
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.733
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.936
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.873
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.921
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.950
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.864
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.858
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.950
LOC100054206 Equus caballus ENSECAG00000006699 I 0.866
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.936
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.950
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.857
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.738
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.936
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.858
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.950
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.759
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.950
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.929
HNRNPA1 Homo sapiens ENSG00000135486 D 0.950
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.921
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.943
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.921
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.786
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.792
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.845
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.779
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.808
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.943
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.929
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.838
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.887
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.929
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.950
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.865
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.772
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.779
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.772
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.950
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.908
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.831
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.726
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.822
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.831
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.921
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.950
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.950
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.859
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.936
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.943
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.943
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.950
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.943
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.936
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.921
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.879
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.943
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.936
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.914
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.936
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.950
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.766
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.929
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.950
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.950
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.950
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.950
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.907
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.752
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.950
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.914
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.950
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.894
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.914
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.872
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.893
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.851
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.000
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.893
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.864
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.879
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.950
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.915
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.887
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.950
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.950
CBU92546 Xenopus laevis CBU92546 I 0.871
CBU92428 Xenopus laevis CBU92428 I 0.857
CBF67672 Xenopus laevis CBF67672 I 0.871
CBF67555 Xenopus laevis CBF67555 I 0.857
AAH72090 Xenopus laevis AAH72090 I 0.871
AAH45260 Xenopus laevis AAH45260 I 0.871
AAA49742 Xenopus laevis AAA49742 I 0.857
AAA49741 Xenopus laevis AAA49741 I 0.857
P17130 Xenopus laevis P17130 I 0.857
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.879