ENSRNOG00000033182 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000033182 T41221_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.930
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.930
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.930
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.909
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.762
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000063886 RRM 9 78
ENSRNOP00000063886 RRM 95 166

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

311 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.724
HNRNPA1 Homo sapiens ENSG00000135486 D 0.944
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.923
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.908
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.944
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.930
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.724
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.944
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.915
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.724
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.845
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.829
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.724
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.887
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.930
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.724
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.937
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.752
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.944
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.759
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.923
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.726
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.930
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.724
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.944
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.937
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.930
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.915
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.887
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.845
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.923
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.937
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.930
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.873
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.944
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.726
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.824
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.724
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.902
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.724
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.724
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.894
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.937
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.724
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.781
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.724
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.772
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.831
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.944
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.764
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.779
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.923
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.937
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.873
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.738
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.731
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.758
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.790
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.901
P51990 Xenopus laevis P51990 I 0.703
AAA49742 Xenopus laevis AAA49742 I 0.852
AAA49741 Xenopus laevis AAA49741 I 0.852
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.859
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.944
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.724
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.873
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.703
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.824
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.944
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.724
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.731
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.908
AAA49948 Xenopus laevis AAA49948 I 0.717
AAB59951 Xenopus laevis AAB59951 I 0.703
AAH43750 Xenopus laevis AAH43750 I 0.703
P51989 Xenopus laevis P51989 I 0.717
P17130 Xenopus laevis P17130 I 0.852
CBU92546 Xenopus laevis CBU92546 I 0.866
CBU92450 Xenopus laevis CBU92450 I 0.717
CBU92428 Xenopus laevis CBU92428 I 0.852
CBF67672 Xenopus laevis CBF67672 I 0.866
CBF67577 Xenopus laevis CBF67577 I 0.717
CBF67555 Xenopus laevis CBF67555 I 0.852
AAI06633 Xenopus laevis AAI06633 I 0.703
AAH72090 Xenopus laevis AAH72090 I 0.866
AAH46692 Xenopus laevis AAH46692 I 0.717
AAH45260 Xenopus laevis AAH45260 I 0.866
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.880
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.944
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.887
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.859
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.701
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.724
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.887
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.894
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.724
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.944
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.944
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.944
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.944
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.724
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.880
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.729
ENSRNOG00000029434 Rattus norvegicus ENSRNOG00000029434 I 0.703
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.852
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.703
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.724
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.710
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.817
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.944
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.852
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.915
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.944
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.753
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.908
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.944
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.915
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.859
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.810
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.838
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.859
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.800
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.838
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.880
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.930
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.733
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.778
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.759
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.783
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.733
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.759
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.852
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.832
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.810
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.703
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.901
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.738
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.000
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.852
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.860
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.852
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.716
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.724
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.728
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.867
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.839
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.901
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.724
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.824
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.866
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.831
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.776
LOC785445 Bos taurus ENSBTAG00000025621 I 0.901
ENSBTAG00000021755 Bos taurus ENSBTAG00000021755 I 0.000
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.719
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.724
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.944
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.717
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.824
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.748
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.831
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.755
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.866
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.944
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.873
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.766
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.839
ENSCAFG00000005307 Canis familiaris ENSCAFG00000005307 I 0.000
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.852
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.831
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.901
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.845
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.710
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.930
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.724
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.710
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.866
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.817
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.930
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.894
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.944
LOC100054206 Equus caballus ENSECAG00000006699 I 0.880
LOC100068539 Equus caballus ENSECAG00000000782 I 0.724
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.852
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.724
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.724
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.944
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.724
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.944
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.852
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.711
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.852
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.930
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.724
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.000
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.724
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.944
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.724
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.852
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.745
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.944
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.915
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.880
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.944
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.724
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.733
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.852
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.755
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.772
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.887
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.937
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.923
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.866
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.880
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.803
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.887
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.923
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.880
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.838
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.880
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.915
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.915
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.724
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.859
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.944
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.944
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.873
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.710
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.901
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.901
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.717