ENSLAFG00000030769 (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000030769 T38141_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.950
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.950
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.950
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.929
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.786
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000021654 RRM 14 83
ENSLAFP00000021654 RRM 104 173

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

315 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.929
HNRNPA1 Homo sapiens ENSG00000135486 D 0.950
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.724
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.773
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.914
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.724
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.757
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.809
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.000
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.809
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.836
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.775
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.857
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.943
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.929
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.950
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.837
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.724
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.865
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.000
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.900
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.775
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.837
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.837
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.724
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.950
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.950
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.950
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.950
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.724
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.764
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.950
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.724
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.950
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.724
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.000
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.831
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.837
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.822
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.724
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.879
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.845
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.929
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.943
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.830
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.838
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.950
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.929
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.921
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.950
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.943
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.936
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.921
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.879
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.943
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.936
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.921
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.950
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.936
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.000
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.837
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.724
Gm8991 Mus musculus ENSMUSG00000059179 I 0.836
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.837
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.943
P51992 Xenopus laevis P51992 I 0.824
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.772
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.950
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.724
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.893
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.843
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.000
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.837
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.950
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.724
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.768
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.829
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.771
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.814
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.836
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.844
AAA49741 Xenopus laevis AAA49741 I 0.879
P51968 Xenopus laevis P51968 I 0.836
P17130 Xenopus laevis P17130 I 0.879
CBU92546 Xenopus laevis CBU92546 I 0.879
CBU92451 Xenopus laevis CBU92451 I 0.824
CBU92428 Xenopus laevis CBU92428 I 0.879
CBF67672 Xenopus laevis CBF67672 I 0.879
CBF67578 Xenopus laevis CBF67578 I 0.824
CBF67555 Xenopus laevis CBF67555 I 0.879
AAI69881 Xenopus laevis AAI69881 I 0.824
AAH72090 Xenopus laevis AAH72090 I 0.879
AAH45260 Xenopus laevis AAH45260 I 0.886
AAA49950 Xenopus laevis AAA49950 I 0.824
AAA49949 Xenopus laevis AAA49949 I 0.836
AAA49742 Xenopus laevis AAA49742 I 0.879
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.731
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.908
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.872
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.000
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.894
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.814
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.764
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.000
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.000
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.914
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.787
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.837
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.887
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.000
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.000
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.907
D4ACP9_RAT Rattus norvegicus ENSRNOG00000021929 I 0.000
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.950
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.829
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.950
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.858
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.724
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.787
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.837
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.823
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.950
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.764
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.879
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.771
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.786
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.000
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.000
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.914
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.851
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.865
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.921
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.797
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.894
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.943
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.929
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.844
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.866
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.879
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.844
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.846
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.921
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.000
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.859
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.860
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.852
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.771
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.858
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.921
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.837
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.724
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.879
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.950
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.950
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.830
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.879
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.879
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.887
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.900
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.929
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.787
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.724
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.845
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.803
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.851
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.824
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.921
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.838
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.831
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.724
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.824
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.858
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.831
LOC785445 Bos taurus ENSBTAG00000025621 I 0.901
LOC781499 Bos taurus ENSBTAG00000021580 I 0.837
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.724
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.950
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.843
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.832
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.893
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.858
HNRNPA3 Canis familiaris ENSCAFG00000015889 I 0.000
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.866
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.793
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.851
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.837
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.873
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.936
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.783
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.846
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.838
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.907
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.879
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.950
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.950
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.724
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.936
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.724
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.844
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.851
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.771
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.936
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.816
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.771
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.724
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.837
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.950
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.724
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.836
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.871
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.787
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.957
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.837
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.724
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.837
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.936
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.859
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.950
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.824
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.746
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.724
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.836
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.922
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.724
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.837
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.724
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.768
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.950
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.724
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.837
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.724
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.950
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.786
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.814
zgc:66127 Danio rerio ENSDARG00000011020 I 0.793
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.921
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.837
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.837
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.887
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.950
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.843
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.879
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.773
LOC100068539 Equus caballus ENSECAG00000000782 I 0.724
HNRNPA3 Homo sapiens ENSG00000170144 I 0.837
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.836
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.950
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.724
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.872
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.936
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.000
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.921
LOC100066794 Equus caballus ENSECAG00000023237 I 0.836
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.950
LOC100054206 Equus caballus ENSECAG00000006699 I 0.873
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.893
HNRNPA3 Erinaceus europaeus ENSEEUG00000006347 N 0.000
D4A6Z0_RAT Rattus norvegicus ENSRNOG00000042924 N 0.000
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.000
D3ZHS1_RAT Rattus norvegicus ENSRNOG00000017364 N 0.000