ROA1_MACMU (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000031613 T39017_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.979
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.979
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.979
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.957
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000038815 RRM 16 85
ENSMMUP00000038815 RRM 107 176
ENSMMUP00000038816 RRM 16 85
ENSMMUP00000038816 RRM 107 176

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

324 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.731
HNRNPA2B1 Tupaia belangeri ENSTBEG00000003219 I 0.000
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.710
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.731
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.000
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.717
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.000
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.000
ENSSSCG00000012503 Sus scrofa ENSSSCG00000012503 I 0.000
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.707
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.731
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.731
P51990 Xenopus laevis P51990 I 0.710
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.738
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.731
P51989 Xenopus laevis P51989 I 0.724
CBU92450 Xenopus laevis CBU92450 I 0.724
CBF67577 Xenopus laevis CBF67577 I 0.724
AAI06633 Xenopus laevis AAI06633 I 0.710
AAH46692 Xenopus laevis AAH46692 I 0.724
AAH43750 Xenopus laevis AAH43750 I 0.710
AAB59951 Xenopus laevis AAB59951 I 0.710
AAA49948 Xenopus laevis AAA49948 I 0.724
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.731
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.710
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.000
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.731
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.731
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.731
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.731
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.731
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.731
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.731
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.724
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.731
LOC538435 Bos taurus ENSBTAG00000038680 I 0.000
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.000
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.000
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.731
LOC516616 Bos taurus ENSBTAG00000002284 I 0.000
LOC100068539 Equus caballus ENSECAG00000000782 I 0.731
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.731
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.731
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.731
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.731
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.731
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.731
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.731
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.731
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.731
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.731
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.731
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.731
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.724