ENSEEUG00000006130 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000006130 T36781_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.986
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.986
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.986
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.964
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000005566 RRM 16 85
ENSEEUP00000005566 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

323 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA49741 Xenopus laevis AAA49741 I 0.893
AAA49742 Xenopus laevis AAA49742 I 0.893
AAA49948 Xenopus laevis AAA49948 I 0.738
AAA49949 Xenopus laevis AAA49949 I 0.857
AAA49950 Xenopus laevis AAA49950 I 0.845
AAB59951 Xenopus laevis AAB59951 I 0.724
AAH43750 Xenopus laevis AAH43750 I 0.724
AAH45260 Xenopus laevis AAH45260 I 0.907
AAH46692 Xenopus laevis AAH46692 I 0.738
AAH72090 Xenopus laevis AAH72090 I 0.907
AAI06633 Xenopus laevis AAI06633 I 0.724
AAI69881 Xenopus laevis AAI69881 I 0.845
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.745
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.986
CBF67555 Xenopus laevis CBF67555 I 0.893
CBF67577 Xenopus laevis CBF67577 I 0.738
CBF67578 Xenopus laevis CBF67578 I 0.845
CBF67672 Xenopus laevis CBF67672 I 0.907
CBU92428 Xenopus laevis CBU92428 I 0.893
CBU92450 Xenopus laevis CBU92450 I 0.738
CBU92451 Xenopus laevis CBU92451 I 0.845
CBU92546 Xenopus laevis CBU92546 I 0.907
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.971
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.864
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.738
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.986
LOC516616 Bos taurus ENSBTAG00000002284 I 0.000
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.745
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.000
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.000
LOC781499 Bos taurus ENSBTAG00000021580 I 0.858
LOC785445 Bos taurus ENSBTAG00000025621 I 0.929
LOC538435 Bos taurus ENSBTAG00000038680 I 0.000
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.796
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.859
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.745
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.859
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.738
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.873
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.943
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.853
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.799
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.914
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.986
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.943
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.888
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.811
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.786
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.799
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.971
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.908
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.793
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.858
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.828
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.887
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.837
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.779
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.866
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.866
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.888
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.880
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.943
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.860
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.738
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.901
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.901
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.964
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.979
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.922
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.818
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.745
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.809
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.964
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.914
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.915
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.986
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.986
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.745
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.858
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.957
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.957
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.921
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.986
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.858
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.858
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.957
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.807
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.986
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.745
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.858
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.745
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.893
LOC100068539 Equus caballus ENSECAG00000000782 I 0.745
LOC100054206 Equus caballus ENSECAG00000006699 I 0.894
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.986
LOC100066794 Equus caballus ENSECAG00000023237 I 0.857
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.936
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.745
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.986
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.857
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.745
HNRNPA1 Homo sapiens ENSG00000135486 D 0.986
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.964
HNRNPA3 Homo sapiens ENSG00000170144 I 0.858
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.986
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.893
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.857
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.745
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.986
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.858
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.745
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.971
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.793
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.745
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.957
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.979
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.936
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.745
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.858
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.943
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.857
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.745
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.986
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.901
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.971
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.858
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.745
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.858
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.745
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.766
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.901
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.979
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.964
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.800
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.799
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.986
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.800
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.808
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.979
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.964
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.745
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.858
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.859
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.745
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.957
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.986
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.858
Gm8991 Mus musculus ENSMUSG00000059179 I 0.857
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.745
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.851
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.971
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.986
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.950
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.971
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.979
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.957
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.971
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.979
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.986
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.745
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.971
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.753
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.964
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.779
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.979
HNRNPA2B1 Ochotona princeps ENSOPRG00000011698 I 0.000
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.879
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.796
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.816
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.745
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.943
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.986
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.858
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.745
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.986
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.986
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.986
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.986
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.745
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.858
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.858
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.929
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.745
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.721
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.908
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.858
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.964
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.836
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.930
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.986
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.850
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.964
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.893
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.986
ENSSSCG00000012503 Sus scrofa ENSSSCG00000012503 I 0.000
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.000
ENSSSCG00000013561 Sus scrofa ENSSSCG00000013561 I 0.000
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.000
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.731
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.858
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.000
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.745
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.724
HNRNPA2B1 Tupaia belangeri ENSTBEG00000003219 I 0.000
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.986
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.936
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.752
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.857
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.843
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.857
HNRNPA2B1 Tarsius syrichta ENSTSYG00000008124 N 0.000
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.745
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.986
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.858
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.000
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.864
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.724
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.914
P17130 Xenopus laevis P17130 I 0.893
P51968 Xenopus laevis P51968 I 0.857
P51989 Xenopus laevis P51989 I 0.738
P51990 Xenopus laevis P51990 I 0.724
P51992 Xenopus laevis P51992 I 0.845