ENSEEUG00000006130 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000006130 T36781_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.986
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.986
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.986
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.964
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000005566 RRM 16 85
ENSEEUP00000005566 RRM 107 176

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

323 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.964
HNRNPA1 Homo sapiens ENSG00000135486 D 0.986
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.893
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.964
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.800
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.799
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.986
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.859
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.800
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.808
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.979
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.964
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.866
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.908
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.849
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.957
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.979
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.766
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.759
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.986
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.719
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.752
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.971
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.879
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.957
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.979
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.936
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.943
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.986
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.901
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.971
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.785
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.986
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.971
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.986
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.986
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.986
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.986
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.908
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.964
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.788
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.930
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.986
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.964
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.986
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.986
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.908
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.936
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.986
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.986
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.986
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.943
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.950
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.971
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.979
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.915
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.957
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.971
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.979
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.986
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.971
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.753
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.964
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.779
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.979
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.779
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.986
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.772
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.971
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.943
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.865
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.888
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.786
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.799
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.971
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.908
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.793
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.828
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.887
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.837
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.779
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.866
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.866
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.782
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.986
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.986
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.747
LOC785445 Bos taurus ENSBTAG00000025621 I 0.929
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.796
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.859
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.769
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.859
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.873
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.943
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.852
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.872
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.853
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.799
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.914
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.888
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.880
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.766
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.986
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.986
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.957
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.957
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.871
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.986
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.908
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.957
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.986
LOC100054206 Equus caballus ENSECAG00000006699 I 0.894
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.986
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.936
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.986
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.901
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.738
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.943
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.731
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.860
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.901
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.824
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.901
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.964
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.979
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.922
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.879
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.964
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.914
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.922
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.915
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.986