HNRNPA1 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000003040 T37765_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		1.000
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		1.000
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		1.000
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.979
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000002992 RRM 16 85
ENSGGOP00000002992 RRM 107 176

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

332 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000009572 Callithrix jacchus ENSCJAG00000009572 N 0.000
ZCCHC5 Microcebus murinus ENSMICG00000004901 N 0.000
Zcchc5 Mus musculus ENSMUSG00000047686 N 0.000
ENSOCUG00000025689 Oryctolagus cuniculus ENSOCUG00000025689 N 0.000
ZCCHC5 Pteropus vampyrus ENSPVAG00000004092 N 0.000
D3ZH95_RAT Rattus norvegicus ENSRNOG00000002429 N 0.000
ZCCHC5 Tupaia belangeri ENSTBEG00000002464 N 0.000
ZCCHC5 Tarsius syrichta ENSTSYG00000008776 N 0.000
fgenesh1_pg.C_scaffold_31000064 Phytophthora ramorum fgenesh1_pg.C_scaffold_31000064 N 0.000