HNRNPA1L2 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000032520 T40812_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		1.000
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		1.000
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		1.000
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.979
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000054640 RRM 16 85
ENSPTRP00000054640 RRM 107 176
ENSPTRP00000054641 RRM 16 85
ENSPTRP00000054641 RRM 107 176

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

333 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZGPAT_BOVIN Bos taurus ENSBTAG00000007498 N 0.000
ENSPPYG00000011246 Pongo pygmaeus ENSPPYG00000011246 N 0.000
ZGPAT Pan troglodytes ENSPTRG00000013750 N 0.000
ZGPAT Pteropus vampyrus ENSPVAG00000013489 N 0.000
Lime1 Rattus norvegicus ENSRNOG00000014235 N 0.000
ZGPAT Spermophilus tridecemlineatus ENSSTOG00000011986 N 0.000
ZGPAT Tetraodon nigroviridis ENSTNIG00000004165 N 0.000
ZGPAT Takifugu rubripes ENSTRUG00000010488 N 0.000
ZGPAT Tursiops truncatus ENSTTRG00000012223 N 0.000
Ame_R014267 Ailuropoda melanoleuca Ame_R014267 N 0.000
AAH84897 Xenopus laevis AAH84897 N 0.000
ZGPAT Procavia capensis ENSPCAG00000001883 N 0.000
ZGPAT Otolemur garnettii ENSOGAG00000004502 N 0.000
ZGPAT Ornithorhynchus anatinus ENSOANG00000004932 N 0.000
ZGPAT Canis familiaris ENSCAFG00000013056 N 0.000
ZGPAT Callithrix jacchus ENSCJAG00000010398 N 0.000
ZGPAT Cavia porcellus ENSCPOG00000014427 N 0.000
ZGPAT Dasypus novemcinctus ENSDNOG00000025874 N 0.000
ZGPAT Felis catus ENSFCAG00000001173 N 0.000
ZGPAT Homo sapiens ENSG00000197114 N 0.000
ZGPAT Gorilla gorilla ENSGGOG00000004801 N 0.000
LOC719499 Macaca mulatta ENSMMUG00000000171 N 0.000
ZGPAT Monodelphis domestica ENSMODG00000017016 N 0.000
Zgpat Mus musculus ENSMUSG00000027582 N 0.000
Q5U4Z3 Xenopus laevis Q5U4Z3 N 0.000