ENSDNOG00000009228 (Dasypus novemcinctus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDNOG00000009228 T36317_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		1.000
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		1.000
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		1.000
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.979
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000007139 RRM 16 85
ENSDNOP00000007139 RRM 107 176

Links

Other RRM family RBPs
Other Dasypus novemcinctus RBPs

332 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 1.000
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.752
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.986
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.879
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.745
LOC538435 Bos taurus ENSBTAG00000038680 I 0.000
LOC785445 Bos taurus ENSBTAG00000025621 I 0.943
LOC781499 Bos taurus ENSBTAG00000021580 I 0.872
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.000
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.000
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.752
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 1.000
LOC516616 Bos taurus ENSBTAG00000002284 I 0.000
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.825
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.936
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.993
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.979
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.915
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.915
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 1.000
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.823
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.979
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 1.000
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.936
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.971
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.971
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.752
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 1.000
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.929
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.929
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.752
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.872
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.841
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.957
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 1.000
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.929
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.812
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.867
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.957
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.887
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.752
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.901
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.873
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.752
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.873
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.810
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.895
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.825
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.872
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.850
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.793
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.880
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.880
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.902
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.894
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.957
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.800
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.812
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.986
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.793
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.874
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.923
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.872
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.872
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.971
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.745
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.821
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.872
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.907
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.752
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.752
LOC100054206 Equus caballus ENSECAG00000006699 I 0.908
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 1.000
LOC100066794 Equus caballus ENSECAG00000023237 I 0.871
LOC100068539 Equus caballus ENSECAG00000000782 I 0.752
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.986
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.950
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.871
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 1.000
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.752
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.871
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.907
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.986
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 1.000
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.807
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.752
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.872
HNRNPA3 Homo sapiens ENSG00000170144 I 0.872
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.752
HNRNPA1 Homo sapiens ENSG00000135486 D 1.000
ENSG00000215492 Homo sapiens ENSG00000215492 I 1.000
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.979
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.752
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.950
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.993
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.971
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.915
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.993
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.979
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.814
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.806
LOC710473 Macaca mulatta ENSMMUG00000012989 I 1.000
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.814
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.822
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.993
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.979
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.779
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.752
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.872
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.752
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.872
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.752
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.957
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.871
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.752
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.752
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.872
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.873
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 1.000
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.872
Gm8991 Mus musculus ENSMUSG00000059179 I 0.871
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.971
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.752
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.752
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.872
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.986
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.908
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 1.000
HNRNPA2B1 Ochotona princeps ENSOPRG00000011698 I 0.000
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.993
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.752
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 1.000
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.986
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.752
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 1.000
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.993
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.986
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.986
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.865
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.964
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.986
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.993
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.971
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.893
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.810
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.793
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.767
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.979
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 1.000
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 1.000
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 1.000
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.752
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.872
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 1.000
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.830
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.752
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.957
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.752
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.872
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 1.000
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.964
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.864
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 1.000
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.944
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.850
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.964
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.872
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.943
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.752
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.728
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.922
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.872
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.907
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.752
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.731
ENSSSCG00000012503 Sus scrofa ENSSSCG00000012503 I 0.000
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.000
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.872
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.738
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 1.000
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.000
ENSSSCG00000013561 Sus scrofa ENSSSCG00000013561 I 0.000
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.703
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.759
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.871
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.864
HNRNPA2B1 Tarsius syrichta ENSTSYG00000008124 N 0.000
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.850
HNRNPA2B1 Tupaia belangeri ENSTBEG00000003219 I 0.000
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 1.000
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.950
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.752
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 1.000
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.872
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.000
CBU92428 Xenopus laevis CBU92428 I 0.907
CBF67672 Xenopus laevis CBF67672 I 0.921
CBF67578 Xenopus laevis CBF67578 I 0.859
CBF67577 Xenopus laevis CBF67577 I 0.745
CBF67555 Xenopus laevis CBF67555 I 0.907
CBU92450 Xenopus laevis CBU92450 I 0.745
CBU92451 Xenopus laevis CBU92451 I 0.859
CBU92546 Xenopus laevis CBU92546 I 0.921
P17130 Xenopus laevis P17130 I 0.907
P51968 Xenopus laevis P51968 I 0.871
P51989 Xenopus laevis P51989 I 0.745
P51990 Xenopus laevis P51990 I 0.731
AAI69881 Xenopus laevis AAI69881 I 0.859
AAI06633 Xenopus laevis AAI06633 I 0.731
AAH72090 Xenopus laevis AAH72090 I 0.921
P51992 Xenopus laevis P51992 I 0.859
AAA49741 Xenopus laevis AAA49741 I 0.907
AAA49742 Xenopus laevis AAA49742 I 0.907
AAA49948 Xenopus laevis AAA49948 I 0.745
AAA49949 Xenopus laevis AAA49949 I 0.871
AAA49950 Xenopus laevis AAA49950 I 0.859
AAB59951 Xenopus laevis AAB59951 I 0.731
AAH43750 Xenopus laevis AAH43750 I 0.731
AAH45260 Xenopus laevis AAH45260 I 0.921
AAH46692 Xenopus laevis AAH46692 I 0.745
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.929
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.879
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.731