ENSG00000215492 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000215492 T37361_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		1.000
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		1.000
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		1.000
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.979
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000383298 RRM 16 85
ENSP00000383298 RRM 107 176
ENSP00000393546 RRM 16 85

Links

Other RRM family RBPs
Other Homo sapiens RBPs

337 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27613.m000645 Ricinus communis 27613.m000645 N 0.000
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.000
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.000
B9GWA9_POPTR Populus trichocarpa POPTR_0003s20310 N 0.000
B9HNZ4_POPTR Populus trichocarpa POPTR_0009s05520 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.000
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.000
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.000
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.000
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.000
estExt_fgenesh2_pg.C_00420 Selaginella moellendorfii estExt_fgenesh2_pg.C_00420 N 0.000
estExt_fgenesh2_pg.C_80472 Selaginella moellendorfii estExt_fgenesh2_pg.C_80472 N 0.000
GSVIVG00001467001 Vitis vinifera GSVIVG00001467001 N 0.000
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.000
MDP0000906147 Malus x domestica MDP0000906147 N 0.000
Medtr4g118330 Medicago truncatula Medtr4g118330 N 0.000
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.000
mgf003557m Mimulus guttatus mgf003557m N 0.000
PK01281.1 Cannabis sativa PK01281.1 N 0.000
PK20504.1 Cannabis sativa PK20504.1 N 0.000
POPTR_0001s05760 Populus trichocarpa POPTR_0001s05760 N 0.000
ppa003564m Prunus persica ppa003564m N 0.000
ppa019338m Prunus persica ppa019338m N 0.000
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.000